Rhodopseudomonas palustris BisA53: RPE_4227
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Entry
RPE_4227 CDS
T00400
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe00061
Fatty acid biosynthesis
rpe00071
Fatty acid degradation
rpe01100
Metabolic pathways
rpe01212
Fatty acid metabolism
rpe02024
Quorum sensing
rpe04146
Peroxisome
Module
rpe_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
RPE_4227
00071 Fatty acid degradation
RPE_4227
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
RPE_4227
09145 Cellular community - prokaryotes
02024 Quorum sensing
RPE_4227
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpe01004
]
RPE_4227
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpe04147
]
RPE_4227
Enzymes [BR:
rpe01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
RPE_4227
Lipid biosynthesis proteins [BR:
rpe01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
RPE_4227
Exosome [BR:
rpe04147
]
Exosomal proteins
Exosomal proteins of breast milk
RPE_4227
Exosomal proteins of breast cancer cells
RPE_4227
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C_3
DUF764
Motif
Other DBs
NCBI-ProteinID:
ABJ08152
UniProt:
Q07IT2
LinkDB
All DBs
Position
4727719..4729650
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AA seq
643 aa
AA seq
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MKDYAGRVAKADTFPKLLRLNALEHGDETALREKDLGLWREITWQDYQDRVRDFALGMVS
LGLGRGDVIGIIGDNRPDWVSAEIATHAIGAMSLGLYRDVLDEEAAYLLTYGEAQLVFAE
DEEQVDKLLALAERAPRLKHIVYSDPRGMRKYDDPRLIEASALAAMGQDRAAREPALYDS
LVDATKGEDVAILCTTSGTTSHPKLAMLAAGRVLKHCATYLAFDPKGPDDEYVSVLPLPW
IMEQVYALGKALLCRMKVNFVEEPDTMMNDFREIAPTFVLFAPRVWEGIAADVRARVMDA
SPLKQRLYELGMKAGLAALANGKHSAFADAVLFRALRDRLGFTRLRSAATGGAALGPDTF
KFFRAMGVPLRTLYGQTEMLGAYTLHKADEVDPDTTGVVMGKEIELKVDNPDVQGIGEIV
VRHPNMFLGYYKNEEASTADIKDGWMQSGDAGYFNPKGQLVVIDRIKDLAETSHGERFSP
QYIENKLKFSPYIAEAVVLGAGRDTLATMICIRYSIISKWAEKKRISFTTYTDLASRPEV
YQLLRKEVETVNATLPAAQRISRFLLLYKELDADDGELTRTRKVRRNVINEKYADIIDGI
YGGASSIPVDTVIKFQDGTTQRIRTTLAVVDLGHAHAHAEAAE
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atgaaggactacgccggccgcgtcgccaaagccgacacctttccaaaactgctgcggctc
aacgccctcgagcacggcgacgaaaccgcgctgcgcgaaaaggatctcgggctgtggcgc
gaaatcacctggcaggactaccaggaccgggtgcgcgacttcgcgctcggcatggtctcg
ctcgggctcggccgcggcgatgtgatcggaatcatcggcgacaatcgcccggactgggtg
tccgccgagatcgccacccacgccattggcgcgatgagcctggggctgtatcgcgacgtg
ctggacgaggaagccgcctatctgttgacctacggcgaggcgcaactggtgttcgccgag
gacgaggagcaggtcgacaagctgctggcgctggccgagcgcgcgccgcggctcaagcac
atcgtctattccgatccgcgcggcatgcggaaatacgacgatccgcggctgatcgaagcc
tcggcgctggccgcgatgggccaggaccgcgccgcgcgcgagccggcgctgtacgactct
ctggtcgacgcgaccaaaggcgaggatgtcgccattctctgcaccacctcgggcaccacc
tcgcatccgaaactggcgatgctggcggccgggcgggtgctgaagcattgtgccacctat
ctcgccttcgaccccaaggggccggacgacgaatacgtctcggtgctgccgctgccctgg
atcatggaacaggtctatgcgctcggcaaagccctgctgtgtcggatgaaggtcaacttc
gtcgaagaacccgacaccatgatgaacgattttcgcgagatcgcgcccacttttgtgctg
ttcgcacccagagtgtgggagggcatcgccgccgatgtccgggcgcgggtgatggatgct
tccccgctgaagcagcgtctgtacgaactcggcatgaaggcgggccttgcggcgctggcg
aacggcaagcattcggccttcgccgacgcggtgctgttccgcgcgctgcgcgaccggctc
ggttttacccggctacgctcggcggcgaccggcggcgccgcgctcggccccgacaccttc
aagttcttccgagccatgggcgtgccgctgcgcacgctgtatggccagaccgagatgctc
ggcgcctacacgctgcacaaggccgacgaggtcgatcccgacaccaccggcgtggtgatg
ggcaaggagatcgagctcaaggtcgacaatccggacgttcagggcatcggcgagatcgtg
gtgcgccaccccaacatgttcctcggctactacaagaacgaggaagcctcgaccgccgac
atcaaggacggctggatgcaatccggcgacgccggctatttcaacccaaaaggccagctg
gtcgtcatcgaccgcatcaaggatctggccgagacctcgcatggcgagcggttctcgccg
caatatatcgagaacaagctgaaattctccccctacatcgccgaggccgtggtgctcggc
gccgggcgtgacacgctcgcgaccatgatctgcatccgctactcgatcatctcgaaatgg
gcagagaagaagcggatcagcttcaccacctacaccgacctcgcctcgcgcccggaggtc
tatcaactgctgcgcaaggaggtcgagaccgtcaacgccacgctgccggcggcgcagcgg
atctcgcgcttcctcttgctctacaaggaactcgacgccgacgacggcgaactgacccgc
acccgaaaagtgcgccgcaacgtgatcaacgagaagtacgccgacatcatcgacggcatc
tacggcggcgcctccagtattccggtcgacaccgtgatcaaattccaggacggcaccacc
cagcgcatccgcaccacgctggcggtggtcgacctcggccatgcccacgcgcatgcggag
gcggcggaatga
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