Rhodopseudomonas palustris BisA53: RPE_4543
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Entry
RPE_4543 CDS
T00400
Name
(GenBank) transcriptional regulator, NifA, Fis family
KO
K02584
Nif-specific regulatory protein
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
RPE_4543
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpe03000
]
RPE_4543
Transcription factors [BR:
rpe03000
]
Prokaryotic type
Helix-turn-helix
Other families
RPE_4543
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
GAF
HTH_8
AAA_5
GAF_2
AAA
Mg_chelatase
AAA_2
bpMoxR
MCM
AAA_16
AAA_30
AAA_3
DUF815
AAA_7
AAA_19
Motif
Other DBs
NCBI-ProteinID:
ABJ08463
UniProt:
Q07HX1
LinkDB
All DBs
Position
complement(5074487..5076217)
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AA seq
576 aa
AA seq
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MVYRDANLAEQPQERSIAPIPLSEIALTGIFEISKILTAPARLEITLANVVNLLQSFMQM
RHGTVSLLADDGVPDITVGAGWNEGTDGRYRARLPAKAIDQIVATSVPLVVENVAAHPMF
SAVDVAALGASEETRVSFIGVPIRIDSRVVGTLTIDRVRDGSSIFRMDADVRFLTMVANL
IGQTVKLHRVVTRDRERLMAESYRLQKELSELKPARERKKVRVDGIIGESPAIRRLLAKV
SVIAKSHSPVLLRGESGTGKELIAKAIHELSSRANGPFIKVNCAAMAESVLESELFGHEK
GAFTGAIATRKGRFELADKGTLFLDEIGEISPAFQAKLLRVLQEQEFERVGGNHTIKVNV
RVVAATNRNLEEAVAKNEFRADLYYRINVVPMILPPLRDRQTDIPLLAGAFLENFNKENE
RELAFDSTSMELLKGCSFPGNVRELENCVRRTATLAPGPAIHADDFACHHDECLSSILWK
SHTERLTPQRPPPEIPLEVAQLGPAEPRSVTPTRPAVVSPAPSREAPSDDLSERDRLIDA
MERTGWVQAKAARLLGLTPRQIGYALKKHDVEVKHF
NT seq
1731 nt
NT seq
+upstream
nt +downstream
nt
atggtctatcgcgacgcaaatctcgctgaacagccgcaagagcgttcgatcgccccgata
ccgctgagcgagatcgcccttaccggcattttcgagatctccaagatcttgaccgcacct
gcgcggctggaaatcaccctcgccaacgtcgtcaacctgctgcagtcattcatgcagatg
cgccacggcaccgtgtcactgctggccgatgacggcgtgccggatatcacggtcggcgcc
ggctggaatgagggcaccgacggccgctaccgcgcccgcctgccggccaaggcgatcgac
cagatagtcgctacttcagtaccgctcgtggtggagaatgtcgcggcgcatccgatgttc
agcgccgtcgatgtcgcggcgctcggcgccagcgaggagacgcgggtgtcgttcatcggc
gtgccgatccggatcgattcccgggtggtcggcacgctgaccatcgaccgggtgcgcgac
ggcagttcgattttccggatggatgccgacgtccgcttcctcaccatggtcgccaatctg
atcggccagaccgtcaagctgcaccgcgtggtgacgcgcgaccgcgagcggctgatggcg
gaaagctatcggctgcagaaagagctgtcggagctcaagcccgcccgcgaacgcaagaag
gtgcgcgtcgacggcatcatcggcgagagcccggcgatccgccggctgctggccaaggtc
agcgtgatcgccaagtcgcattcgcctgtgctgctgcgcggcgaatccggcaccggcaag
gaactgatcgccaaggcgatccacgaattgtcgtcccgcgccaacggcccgttcatcaag
gtcaattgcgcggcgatggcggaatcggtgctggaatccgaattgttcggccatgagaag
ggcgccttcaccggcgccatcgccacccgcaaggggcgcttcgaacttgccgacaagggc
accctgtttctcgacgaaatcggcgaaatctccccggcgttccaggccaagctgctgcgt
gtgttgcaggagcaggagttcgagcgggtcggcggcaatcacaccatcaaggtcaatgtc
cgcgtcgtggcggcgaccaaccgcaacctcgaagaggcggtggcgaagaacgaattccgc
gccgatctgtactaccgcatcaacgtggtgccgatgatcctgccgccgctgcgcgaccgg
cagaccgatatcccgctgctggcgggcgccttcctggagaacttcaacaaggagaacgag
cgcgagctcgccttcgactcaacctcgatggagttgctgaaaggctgttcgttccccggc
aatgtccgcgagctggagaactgcgtgcggcgcaccgcgacgctggcgccgggacctgcg
atccatgccgacgacttcgcctgtcatcacgacgagtgtctgtcgtcgattctgtggaag
agccacaccgaacgcctgacgccgcagcggccgccgccggaaatcccgctggaagtcgcc
cagctcggtccggccgagccgcgcagcgtcactcccacccgaccggcggtggtctcgccg
gcgccgtcgcgcgaggcgccgtccgacgacctgtcggagcgcgatcggctgatcgacgcg
atggagcgcaccggctgggtgcaggccaaggcggcgcgactcttggggctgacgccgcgg
cagatcggctacgcgctgaagaagcacgacgtcgaggtcaagcacttctga
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