Rhodopseudomonas palustris BisA53: RPE_4647
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Entry
RPE_4647 CDS
T00400
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe00630
Glyoxylate and dicarboxylate metabolism
rpe00680
Methane metabolism
rpe01100
Metabolic pathways
rpe01120
Microbial metabolism in diverse environments
rpe01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
RPE_4647
09102 Energy metabolism
00680 Methane metabolism
RPE_4647
Enzymes [BR:
rpe01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
RPE_4647
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
NADH-G_4Fe-4S_3
Molybdop_Fe4S4
Fer4_7
Fer4_Nqo3
Fer4
Fer4_10
Fer4_9
Fer4_21
Fer4_6
Fer4_15
Fer4_16
Fer4_NDSU1
Fer4_2
TPP_enzyme_M
Motif
Other DBs
NCBI-ProteinID:
ABJ08567
UniProt:
Q07HL7
LinkDB
All DBs
Position
complement(5217349..5220195)
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AA seq
948 aa
AA seq
DB search
MSLIHEIDYGTPRSKSETMVTLSIDGQSVTVPEGTSIMRAAMEIGTQIPKLCATDMMDAF
GSCRLCLVEVEGRAGTPASCTTPVAEGIVVRTQTERLKQLRKGVMELYISDHPLDCLTCS
ANGDCELQDMAGAVGLRDVRYGQNGEQHPNPGIDASNPYFTYDPSKCIVCSRCVRACEDV
QGTFALTIAGRGFDSVVSAGMQESFLGSECVSCGACVQACPTATLNEKSIIEIGTPEHSV
VTTCAYCGVGCSFKAEMRGEEVVRMLPYKDGKANRGHSCVKGRFAWGYATHRERILKPMI
REKITDPWREVSWVEAFTYAASEFTRIQQTYGRDSIGGITSSRCTNEETYLVQKLIRAGF
GNNNVDTCARVCHSPTGYGLSTTFGTSAGTQDFDSVEHTDVVIIIGANPTDGHPVFASRL
KKRLREGAKLIVVDPRRTDIVRSARVEAAHHLALLPGTNVAVLTALAHVIVTEGLAAEAF
VRERCDWQEFQDWAAFVSLPHNSPEATALATGVDPTELRQAARLFATGGNGAIYYGLGVT
EHSQGSTTVMAIANLAMATGNIGRPGVGVNPLRGQNNVQGACDMGSFPHELPGYRHIATD
SVRESFEQLWGVTLNKEPGLRIPNMLDAAVDGSFKALYVQGEDILQSDPNTKHVAAGLAA
MECVIVHDLFMNETANYAHVFLPGSTFLEKNGTFTNAERRIQRVRKVMAPRNGLEDWEVT
IGLGKAMGFAMTYDHPSQIMDEIAALTPTFAGVSYQKLDELGSVQWPCNDKMPEGTPVMH
IDHFVRGKGKFVITEYVATDEKTGPRFPLLLTTGRILSQYNVGAQTRRTANVVWHDEDRL
EIHPHDAEQRGVRDGDWVRLASRAGETTLRALITERVAPGVVYTTFHHPDTQANVVTTEY
SDWATNCPEYKVTAVQVSPSNGPSEWQKTYDEQARNARRIAAAIEAAE
NT seq
2847 nt
NT seq
+upstream
nt +downstream
nt
atgtcgctgattcatgaaatcgactacggcacgccgcgctccaagtccgagacgatggtg
acgctgagcatcgacggccaatccgtcacggtgccggagggcacctcgatcatgcgcgcg
gcgatggagatcgggacgcaaatcccaaagctctgcgccaccgacatgatggacgcgttc
ggctcctgccggctctgcctcgttgaggtggagggccgcgcgggcacgccggcctcctgc
acgacgccggtggccgaggggatcgtcgttcgcacccagactgagcggctgaagcaattg
cgcaagggggtgatggagctctacatctccgaccatccgctggattgcctgacctgctcg
gccaatggcgattgcgaattgcaggatatggccggcgcggtgggcctgcgcgacgtgcgc
tacggccagaacggcgagcagcatcccaaccccggcatcgacgcctcgaatccgtacttc
acctacgatccgtcgaaatgcatcgtctgctcgcgctgcgtccgcgcctgcgaggacgtg
cagggcacttttgcgctgaccatcgccggccgcggtttcgactcggtggtgtcggcgggg
atgcaggagtcgttcctgggctcggaatgcgtgtcctgcggcgcctgcgtgcaggcctgc
ccgaccgcgacgctgaacgagaaatcgatcatcgagatcggtacgccggaacattcggtg
gttactacttgcgcctattgcggcgtcggctgctcgttcaaggccgagatgcgcggcgag
gaagtggtgcggatgctgccctataaggacggcaaggccaatcgcggccactcctgcgtc
aagggccgcttcgcctggggctacgccacccatcgcgagcgcatcctgaagccgatgatt
cgcgaaaagatcaccgatccgtggcgcgaagtgtcgtgggtcgaggcgttcacttacgcc
gcgtcggaattcacgcgtatccagcagacctatggccgcgactcgatcggcggcatcacc
tcgtcgcgctgcaccaatgaagagacctatctggtgcagaagctgatccgcgccggcttc
ggcaacaacaatgtcgatacttgcgcgcgggtgtgccactcgccgaccggctatggcctc
tcgaccaccttcggcacctcggccggcacgcaagacttcgactcggtcgagcacaccgac
gtggtgatcatcatcggcgccaatccgaccgacggccatccggtattcgcgtcgcggctg
aagaagcggctgcgcgaaggagcaaaactcatcgtggtcgatccgcgccgtaccgatatc
gtgcgctcggcccgagtcgaggcggcgcatcatctggccttgctgccgggcaccaatgtc
gcggtgctgaccgcgctggcgcatgtcatcgtcaccgaggggctcgccgccgaggccttc
gtgcgcgagcgctgcgattggcaggaattccaggactgggcggcgttcgtatcgctgccg
cacaatagcccggaggcgaccgcgctcgccaccggcgtcgacccgaccgagctgcgccag
gcggcgcggctgttcgccaccggcggcaatggcgcgatctattacggtctcggcgttacc
gaacacagccaaggctcgaccacggtgatggcgatcgccaatctggcgatggccaccggc
aatatcggccgccccggcgtcggcgtgaatccgctgcgcggccagaacaacgtgcagggc
gcctgcgacatgggctcgttcccgcacgaactgccgggctatcgccatatcgccaccgac
tccgtgcgcgagagctttgagcaactatggggcgtgacgctgaacaaggagccggggctg
cgcatccccaacatgctcgacgccgcggtcgacggctcgttcaaggcgctctatgtgcag
ggcgaggacattctgcagtccgatcccaacaccaagcacgtcgcggcgggattggccgcg
atggagtgcgtcatcgtgcatgatctgttcatgaacgagaccgcgaactacgcccacgtc
ttcctgccgggctccaccttcctggagaagaacggcaccttcaccaatgccgaacgccgc
atccagcgcgtgcgcaaggtgatggcgccgcgcaacgggctggaggactgggaggtcacc
atcgggctcggcaaggcgatgggttttgcgatgacctacgatcacccgtcgcagatcatg
gacgagatcgcggcgctgacgccgactttcgccggcgtgtcctaccaaaaactcgacgaa
ctgggctcggtgcagtggccgtgcaacgacaagatgccggaaggcacgccggtgatgcat
atcgatcacttcgtgcgcggcaagggcaagttcgtcatcaccgaatatgtcgcgaccgac
gagaagaccgggccgcgtttcccgttgctgctcaccaccgggcgaattctcagccagtac
aatgtcggcgcgcagaccaggcgcacggcgaatgtggtgtggcacgacgaggaccggctc
gaaatccatccgcacgacgccgagcagcgcggcgtgcgcgatggcgactgggtgcggctg
gcgagccgcgccggcgagaccacgctgcgcgcgctgatcaccgagcgcgtcgcgccgggc
gtggtctacaccacgtttcatcaccccgatacgcaagccaacgtcgtcaccaccgaatat
tccgactgggccaccaattgtccggaatacaaggtcaccgcggtgcaggtgtcgccgtcg
aacgggccgtcggaatggcagaagacctatgacgagcaggcgcgaaacgcccggcggatc
gccgccgccatcgaagccgcggagtag
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