Rhodopseudomonas palustris BisA53: RPE_4813
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Entry
RPE_4813 CDS
T00400
Name
(GenBank) DNA polymerase III, subunits gamma and tau
KO
K02343
DNA polymerase III subunit gamma/tau [EC:
2.7.7.7
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe03030
DNA replication
rpe03430
Mismatch repair
rpe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
RPE_4813
03430 Mismatch repair
RPE_4813
03440 Homologous recombination
RPE_4813
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpe03032
]
RPE_4813
03400 DNA repair and recombination proteins [BR:
rpe03400
]
RPE_4813
Enzymes [BR:
rpe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
RPE_4813
DNA replication proteins [BR:
rpe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
RPE_4813
DNA repair and recombination proteins [BR:
rpe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
RPE_4813
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_gamma3
DUF3646
DNA_pol3_delta2
DNAX_ATPase_lid
AAA
AAA_22
AAA_16
AAA_30
AAA_5
RuvB_N
AAA_18
AAA_14
TsaE
AAA_assoc_2
RCF1-5-like_lid
AAA_lid_RFC1
AAA_24
AAA_19
TraI_hel_assoc_N
nSTAND3
SRP54
AAA_28
SKI
ABC_tran
Zeta_toxin
Rad17
CbiA
AAA_33
Motif
Other DBs
NCBI-ProteinID:
ABJ08732
UniProt:
Q07H52
LinkDB
All DBs
Position
complement(5391268..5393157)
Genome browser
AA seq
629 aa
AA seq
DB search
MTDAGHPATPPTDPAAEQPGFALGAAATPAVAAAPAEPYRVLARKYRPNSFEHLIGQDAM
VRTLSNAFETGRIPQAWILTGVRGVGKTTTARILARALNYETADGSVKAPTIHMPGPGVH
CQAIMEGRHMDVLEMDAASHTGVDDVRQINDSVRYAPAGARYKVYIIDEVHMLSTAAFNA
FLKTLEEPPEHAKFVFATTEIRKVPVTVLSRCQRFDLRRVEADVLMSHLGSIAAKENVEI
EPEALGIIARAAEGSVRDSLSLLDQAIAHAAGIVRADQVRQMLGLADRTRVIDLFGHLAS
GDIAAAFAEFRDQYDTGADPVVVLSDLAEFVNFVTRVKIVPSIADNVAFGETERLRARDY
ATKLSMRVLSRMWQMLLKGITEVQGATRQVAAAEMVLVRIAYAADLPTPDEAVRMLEQNG
GGSPSGANAARSNGSVSSGAPQASALQSSMPRIASPRGGAEASFSGRPQMATPAPDPAPS
AMPVLKIATFPELVALAAEKRDLMVRAALEADVRLVRIEDGRIELALERTASRTLINDLS
RKLEQWTGRRWAVIVSNAEGQPTLRSQALQQQTARERAAESDPRVQEVLARFPGAKVIEV
RRLTPETPGTLENNGDFSGDPSENVDNDD
NT seq
1890 nt
NT seq
+upstream
nt +downstream
nt
atgaccgacgctggccaccccgcaacgcccccgaccgaccctgccgccgagcagcccggc
tttgcgctcggcgccgccgcgactccggctgtcgctgcagccccggccgagccctatcgg
gtgctggcccgcaaatatcgccccaacagtttcgagcatctgatcggccaggacgccatg
gtgcggacgctgtcgaacgcgttcgagaccgggcggattccgcaggcctggattctcacc
ggcgtccgcggcgtcggcaagaccaccaccgcgcggattctggcacgcgccctcaactac
gagacggcggacggctcggtgaaggcgccgaccatccacatgcccggccccggcgtgcat
tgccaggcgatcatggaaggccggcacatggacgtgctggaaatggacgccgcctcccac
accggcgtcgacgacgtccggcagatcaatgacagcgtgcgctacgcgccggccggcgcg
cgctacaaggtctacatcatcgacgaagtccacatgctgtcgaccgcggccttcaacgcc
tttttgaagacgctggaagagccgccggagcacgccaaattcgtgttcgccaccaccgaa
atccgcaaagtcccggtgacggtgctgtcgcgctgccagcgcttcgatttgcgccgcgtc
gaggccgacgtgctgatgagccatctcggcagcatcgccgccaaggaaaacgtcgagatc
gagccggaagcgctcggcatcatcgcgcgcgcggccgaaggctcggtgcgcgattcgctg
tcgctgctcgatcaggcgatcgcgcatgccgccggcatcgtgcgcgccgatcaagtgcgg
cagatgctggggctcgccgaccgcacacgggtgatcgatctgttcgggcatctcgcctcc
ggcgatatcgccgcggccttcgccgagtttcgcgatcaatacgacaccggcgccgatccg
gtggtagtgctgagcgatctggccgaattcgtcaatttcgtcacccgcgtgaagatcgtg
ccgtcgatcgccgacaatgtcgctttcggcgagactgagcggctgcgggcgcgcgactac
gcgacaaagctgtcgatgcgggtgctgtcgcggatgtggcagatgctgctgaagggcatc
accgaggtgcagggtgcgacgcgacaggtcgcggcggcggagatggtattggtgcggatc
gcctatgcggccgatctgccgacgccggacgaagccgtgaggatgctcgagcagaatggc
ggcggttcgccgtcgggggccaacgccgcgcggagcaacggctcggtatcgtcgggcgct
ccgcaagcatcggcgttacaatcatcgatgccgcggatcgcctcgccgcgcggcggagcc
gaagcctcgttctccggccgtccgcaaatggcgacgcctgcgccggatccggcgccatcg
gcgatgccggtgctgaagatcgcgacgtttccggaactggtagcgctcgccgcggagaag
cgcgacctgatggttcgcgcggcgctggaggccgacgtccggctggtgcggattgaggac
ggtcgaatcgaactggcgctggaacgcaccgcgtcaaggacgctgatcaatgacctgtcg
cgcaagttggagcaatggaccggccggcgctgggcggtgatcgtgtccaatgcggaaggc
cagccgaccttgcggtcgcaagccttgcagcagcagaccgcgcgcgaacgcgccgccgaa
tccgatccgcgcgtgcaggaggtgctggcgcgattccccggcgccaaggtgatcgaggtg
cgtaggctcaccccggaaacgcccggtacgcttgaaaataacggcgacttctcgggcgat
ccgtccgaaaatgtcgacaacgacgattga
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