Rhodopseudomonas palustris BisA53: RPE_4837
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Entry
RPE_4837 CDS
T00400
Name
(GenBank) Pyridoxal-dependent decarboxylase
KO
K01593
aromatic-L-amino-acid/L-tryptophan decarboxylase [EC:
4.1.1.28
4.1.1.105
]
Organism
rpe
Rhodopseudomonas palustris BisA53
Pathway
rpe00350
Tyrosine metabolism
rpe00360
Phenylalanine metabolism
rpe00380
Tryptophan metabolism
rpe01100
Metabolic pathways
rpe01110
Biosynthesis of secondary metabolites
Brite
KEGG Orthology (KO) [BR:
rpe00001
]
09100 Metabolism
09105 Amino acid metabolism
00350 Tyrosine metabolism
RPE_4837
00360 Phenylalanine metabolism
RPE_4837
00380 Tryptophan metabolism
RPE_4837
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpe04147
]
RPE_4837
Enzymes [BR:
rpe01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.1 Carboxy-lyases
4.1.1.28 aromatic-L-amino-acid decarboxylase
RPE_4837
4.1.1.105 L-tryptophan decarboxylase
RPE_4837
Exosome [BR:
rpe04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
RPE_4837
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Pyridoxal_deC
Beta_elim_lyase
Aminotran_1_2
Aminotran_5
PDXDC1-like_cen2
SepSecS
Motif
Other DBs
NCBI-ProteinID:
ABJ08756
UniProt:
Q07H28
LinkDB
All DBs
Position
5419177..5420664
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AA seq
495 aa
AA seq
DB search
MTLGMSTSEGRPGDLPGPSETLDPADWTELRALGHRMLDDMLDYVANVRERPVWQPIPDA
VRGEFRKDLPQNPSDLGEVYDEFSELIAPYATGNVHPGFMGWVHGGGTPVGILAEMLAAG
LNANCGGRNHMPIEVERQIVEWVRQMFRFPEGASGVFVTGTSMANLMAVLVARTAKLGVD
IRHRGLADHKLTAYTSVSAHGCVAQAMDLAGLGRDALRRIHADRAHRVDVAALQARIKED
RAAGFEPFMVIGSAGTVDTGAVDDLAALADLCQQEKLWFHIDGAYGALGMLSPRVAPLLI
GLERADSIAFDFHKWGQVQYDAGFLMVRDGEQHRATFAAPVAYLRRETRGLAAGSPWPCD
FGPDLSRGFRALKTWFTLKTYGADKLGAMIGRTCLLAKDLEAKIAAEPRLQLLAPVMLNI
VCFRFRGEDANAANAINSEIVADLHESGIAAPSTTMIGGELAIRVAIVNHRTDTPDLDAM
LEAVLKFGAARVSSP
NT seq
1488 nt
NT seq
+upstream
nt +downstream
nt
atgactttgggtatgagtacgtcggaaggccgccccggcgacttgccggggccgagcgag
acgctcgatcctgccgactggaccgagctgcgcgcgctcggccaccgcatgctcgacgac
atgctggactatgtcgccaatgtccgcgagcggccggtgtggcagccgatccccgatgcg
gtgcgcggcgaattccgcaaagacctgccgcagaacccatcggacctcggtgaggtctat
gacgaattcagcgagctgatcgcgccctacgccaccggcaatgtgcatcctggcttcatg
ggctgggtccatggcggcggcacgccggtggggattttggcggagatgctggcggcaggg
ctgaacgccaattgcggcggccgcaaccacatgccgatcgaggtcgaacgccagatcgtc
gaatgggtccggcagatgtttcgattcccggaaggcgccagcggcgtgttcgtcaccggc
acctcgatggcgaacctgatggccgtgctggtcgcgcgcaccgccaagcttggcgtcgac
atccggcaccgcggcctcgccgaccacaagctcaccgcctacacctcggtgtcggcgcat
ggctgcgtcgcccaggcgatggatctcgccggcctcggccgcgacgcgctgcgccggatc
cacgccgaccgcgcgcatcgcgtcgacgtcgcggcgctgcaggcccgcatcaaggaagat
cgcgcggccgggttcgaaccgttcatggtgatcggctcggctggcaccgtcgacaccggc
gcggtcgacgatctcgccgcgctcgccgacctttgccagcaagagaagctgtggtttcac
atcgacggcgcctatggcgcgctcggcatgctgtcgccgcgggtcgcgccgctgctgatc
gggctggagcgcgcggattcgatcgcgttcgacttccacaaatgggggcaggtgcaatac
gacgccggcttcctgatggtacgcgacggcgaacagcatcgcgccactttcgccgccccc
gtggcctatctgcgccgcgagacccgcgggctcgccgccggctcgccctggccctgcgac
ttcggcccggacctgtcgcgcggctttcgcgcgctaaagacctggttcacgctgaaaacc
tacggcgccgacaagctcggcgcgatgatcgggcggacctgtctgctggcgaaggacttg
gaagccaagatcgccgccgagccgcggctgcaactcctggcgccggtgatgctgaacatc
gtctgcttccggtttcgcggcgaggacgccaatgcggccaacgccatcaattccgagatc
gtcgccgacctgcacgagtcgggcatcgccgcgccgtcgaccaccatgatcggcggcgag
ctggcgatccgggtggcgatcgtcaatcatcgcaccgacacgcccgacctcgacgccatg
ctcgaggccgtgctgaaattcggcgccgcgcgggtcagtagtccttga
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