Candidatus Riesia pediculischaeffi: AOQ87_00425
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Entry
AOQ87_00425 CDS
T10207
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
rped Candidatus Riesia pediculischaeffi
Brite
KEGG Orthology (KO) [BR:
rped00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rped03016
]
AOQ87_00425
Enzymes [BR:
rped01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
AOQ87_00425
Transfer RNA biogenesis [BR:
rped03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
AOQ87_00425
Prokaryotic type
AOQ87_00425
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
Motif
Other DBs
NCBI-ProteinID:
ARC53170
UniProt:
A0A1V0HK13
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All DBs
Position
complement(85164..85955)
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AA seq
263 aa
AA seq
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MQNRIALGIKYDGTRYHGWQRQIGLSSIQECLEDSLKKLTNEEIKVFCGGRTDAGVHALG
QVVHFETSKIRKDSVWISGVNHYLPRDISVSWKKNVSYEFHARFSAISRYYRYIIFNAEV
RPAVLYSNVFHVPERLDHENMNEAAQLLLGEQDFCSFISSDHQNRSTTRNIQYACVRRSL
GYVIVDIQANSFAYNMVRNIVGSLIEIGKGKRRVEWIGDLIKMRDRTKSGPKINSRGLYL
VCIEYPKKFDLPNYDISSSLIVI
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgcagaacaggattgcgttaggaataaagtatgatggcacacgatatcacggttggcag
agacagatcggattaagcagtatacaagagtgtttagaagattcgttaaaaaaattaaca
aatgaagagataaaagtattttgtggaggaaggacagatgcaggagtacatgctctcgga
caggtggtacattttgaaacttccaaaatacggaaggattcagtttggatatctggtgta
aatcattatctaccaagagatatttcagtgtcttggaaaaaaaatgtatcctacgaattt
catgcaagattcagcgccatatctaggtattatcgatatattattttcaacgcagaagtt
cgtccagctgtgttgtattccaatgtttttcatgttcctgaaagactggatcatgagaat
atgaatgaagctgctcaactcctactaggagaacaggatttttgttcatttatttcatct
gatcatcaaaatcgttcgactacaaggaatatacaatacgcatgtgtgagaagatcgtta
gggtatgttatcgtggatatccaagcaaattcttttgcctacaacatggttagaaatatt
gttggaagtttaatcgaaattggaaaaggtaaaagaagggtagaatggataggtgatttg
atcaaaatgcgagatagaactaaatctggaccgaaaataaattcgagaggattatatctg
gtttgtatagaatatccaaaaaagttcgatcttcctaattatgacatttcatcttctttg
atagtaatttaa
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