Candidatus Riesia pediculischaeffi: AOQ87_01240
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Entry
AOQ87_01240 CDS
T10207
Name
(GenBank) uracil-DNA glycosylase
KO
K03648
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
rped Candidatus Riesia pediculischaeffi
Pathway
rped03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rped00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AOQ87_01240
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rped03400
]
AOQ87_01240
Enzymes [BR:
rped01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
AOQ87_01240
DNA repair and recombination proteins [BR:
rped03400
]
Eukaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
AOQ87_01240
Prokaryotic type
AOQ87_01240
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Virulence_RhuM
Motif
Other DBs
NCBI-ProteinID:
ARC53302
UniProt:
A0A1V0HKN9
LinkDB
All DBs
Position
255219..255905
Genome browser
AA seq
228 aa
AA seq
DB search
MIKEKRENNFNWTKFLSQESKKPYFIKIIKKIKEVRNSGKIIYPKDEDIFNALHYTEFQK
IKVVILGQDPYHHPNQSHGLSFSVFPSAKIPPSLRNIYKELKDDVVNFKIPNHGCLIKWA
RQGVLLLNSILTVERGKPLSHGDIGWQIFTDRIISQISLLKSGVVFLLWGNFAKRKRKVI
DENRHYILESTHPSPFSSNFGFFGCKHFSKTNRILKEQKLKLIDWNLS
NT seq
687 nt
NT seq
+upstream
nt +downstream
nt
atgataaaagaaaaaagagaaaacaactttaattggacgaaatttctttcacaagaaagc
aaaaaaccatattttataaagattataaaaaaaataaaagaggtaagaaattctggaaag
ataatatatccgaaagatgaagatatttttaacgcattacactatactgaatttcaaaaa
atcaaggtagtcatcttagggcaagatccttatcatcatccgaatcaatctcatggtctg
tctttttccgtttttccaagcgctaaaatcccaccttctttaagaaacatttacaaagaa
ctaaaagatgacgtagtaaacttcaaaataccgaatcatgggtgtttgataaaatgggca
agacagggtgttcttctattaaatagtatactaacagttgaaagaggaaaaccactttct
catggtgatatcggttggcaaatatttacagatagaatcatttcccaaattagtttactg
aaaagtggggtagtttttctgttatggggaaatttcgccaagaggaaaaggaaagtaata
gatgaaaacagacattatatccttgaatccacacatccttctccgttctcttcaaatttt
ggatttttcgggtgtaaacacttttcaaaaacaaaccgaatattgaaggaacaaaaattg
aagttaatcgattggaacttatcctag
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