Roseovarius pelagicus: N7U68_01245
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Entry
N7U68_01245 CDS
T09340
Name
(GenBank) aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme
KO
K00600
glycine hydroxymethyltransferase [EC:
2.1.2.1
]
Organism
rpel
Roseovarius pelagicus
Pathway
rpel00260
Glycine, serine and threonine metabolism
rpel00460
Cyanoamino acid metabolism
rpel00630
Glyoxylate and dicarboxylate metabolism
rpel00670
One carbon pool by folate
rpel00680
Methane metabolism
rpel01100
Metabolic pathways
rpel01110
Biosynthesis of secondary metabolites
rpel01120
Microbial metabolism in diverse environments
rpel01200
Carbon metabolism
rpel01230
Biosynthesis of amino acids
rpel01240
Biosynthesis of cofactors
rpel04981
Folate transport and metabolism
Module
rpel_M00140
C1-unit interconversion, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
N7U68_01245
09102 Energy metabolism
00680 Methane metabolism
N7U68_01245
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
N7U68_01245
09106 Metabolism of other amino acids
00460 Cyanoamino acid metabolism
N7U68_01245
09108 Metabolism of cofactors and vitamins
00670 One carbon pool by folate
N7U68_01245
09150 Organismal Systems
09154 Digestive system
04981 Folate transport and metabolism
N7U68_01245
Enzymes [BR:
rpel01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.2 Hydroxymethyl-, formyl- and related transferases
2.1.2.1 glycine hydroxymethyltransferase
N7U68_01245
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Gene cluster
GFIT
Motif
Pfam:
SHMT
Beta_elim_lyase
DegT_DnrJ_EryC1
Aminotran_1_2
SelA
Motif
Other DBs
NCBI-ProteinID:
UXX83341
LinkDB
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Position
complement(31937..33253)
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AA seq
438 aa
AA seq
DB search
MTLAIRPWVPAACETRVQTIATRTAGATAPDIAARLETLAEDNRQIHERDCFNLNPATNV
MNPRAEALLASGIGSRPSLGYPGDKYEMGLEAIEEIEVIAAALCAEVFGARHAEIRVPSG
AIANLYAFMATCKPGDAIIAPPASIGGHVTHHGAGCAGLYGLRSLPASVSADGYTVDVDA
LRTLAHKSNSALITIGGSLNLFEHPVAQVREIADEVGAKLLFDAAHQCGIIAGRAWANPL
DNGAHLMTMSTYKSLGGPAGGLIVTNDDEMAERLDAIAFPGMTANFDAAKSAALAMGMLD
WRNHGAAYAAEMITLAQALAAALADEGVPIFAAKRGYTNSHQFAIEAANWGGGQAASKTL
RKAGFLACGIGLPIDAVPGDMNGLRIGTPELVRWGVTSDHVPQLAGLIAKALRADEPATL
APEVAALRAEFDTLHHIN
NT seq
1317 nt
NT seq
+upstream
nt +downstream
nt
atgacactcgccattcgcccttgggttcccgccgcttgcgaaacccgcgttcagaccatc
gccacgcgtactgcgggtgcaaccgcacccgacatcgccgcgcgactggaaacgctcgcc
gaggataatcgccagatccacgagcgcgattgcttcaacctcaatccggccaccaacgtg
atgaacccccgcgccgaggcgctgttggcctccgggatcggatcgcgcccgtcgctcggg
tatcccggcgacaaatacgaaatggggctggaagccatcgaagagattgaggtgatcgcc
gccgcgctttgtgccgaggttttcggcgcgcgtcacgctgaaatccgcgtgccctctggt
gccatcgccaacctctatgcctttatggcgacgtgcaaacccggcgatgcgatcatcgcc
cccccggccagcatcgggggtcacgtcacccatcatggtgcaggctgtgcgggcctctat
ggcctgcgttccctgcctgcctcggtcagtgccgatggatataccgtcgacgtcgacgcc
ctgcgcacactggcgcacaaatcaaattcggcattgatcactatcggaggcagcctcaac
ctgtttgagcatcccgtagcccaagtccgcgaaatcgcggatgaagtgggcgccaagctg
ctctttgacgccgcgcaccaatgcggcatcattgccgggcgcgcatgggccaatccgctg
gacaacggcgcacatcttatgacgatgagcacctacaaaagcctcggtggtcctgccggt
gggttgatcgtaaccaatgacgacgagatggcggaacggctcgacgccattgcctttccc
ggcatgaccgccaatttcgatgccgctaaatctgccgcactggccatgggtatgctggat
tggcgaaaccacggcgcggcttatgcggccgagatgatcacgctggcccaggcactggcc
gcagccctcgccgatgagggcgtgccgattttcgccgcgaaacgcggatacaccaattcg
caccagttcgccatcgaggcggccaattggggcggcgggcaggccgcatcaaaaacactg
cgcaaggcaggatttctggcctgcggcatcggtctgccgatagatgcggtgcccggcgat
atgaacggcttgcgcatcgggacgcccgaactggttcggtggggggtgacgtcagaccat
gtgccgcaactggccggattgattgcaaaagccttgcgcgccgatgagccggccaccctc
gcccccgaagtggccgccctgcgcgccgagttcgatacactgcaccacatcaactaa
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