Roseovarius pelagicus: N7U68_01495
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Entry
N7U68_01495 CDS
T09340
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpel
Roseovarius pelagicus
Pathway
rpel03420
Nucleotide excision repair
rpel03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
N7U68_01495
03430 Mismatch repair
N7U68_01495
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpel03400
]
N7U68_01495
Enzymes [BR:
rpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N7U68_01495
DNA repair and recombination proteins [BR:
rpel03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
N7U68_01495
MMR (mismatch excision repair)
Other MMR factors
N7U68_01495
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
AAA_30
UvrD_C_2
PcrA_UvrD_tudor
AAA_11
DapB_N
Motif
Other DBs
NCBI-ProteinID:
UXX83388
LinkDB
All DBs
Position
78892..81243
Genome browser
AA seq
783 aa
AA seq
DB search
MSSYDESDAFEGASLAARAMAARGAPYLDELNPAQRAAVEALDGPVLMLAGAGTGKTKAL
TARIVHLLNTGRARPNEILSVTFTNKAAREMKDRVGRLLGQSIEGMPWLGTFHSICVKLL
RRHAELVGLKSNFTILDTDDQVRLMKQLIQAAGIDDKRWPARMLAGIIDNWKNRAWTPAN
LPASEAGAYDGKGPQLYALYQARLKELNAVDFGDLLLHVVTIFQTHDDVLQQYQRWFRYI
LVDEYQDTNVAQYLWLRLLAGAHKNICCVGDDDQSIYGWRGAEVGNILRFEKDFPGAHVV
RLEQNYRSTPHILAAASGVIAGNKGRLGKELWTEAEEGEKVRLIGHWDGEEEARWIGEEI
EAMQGGTRGMRPIRRDEVAILVRASHQMRAFEDRFLTIGLPYRVIGGPRFYERMEIRDAM
AYFRVVTSPSDDLAFERIVNTPKRGLGDKAQQTIQRIARANGVPLVQGAALAVEQGEIKG
KGGTELARLLDGLTRWGRLIGDASVSHVELAEMILDESGYTGMWQNDKTPEAPGRLENLK
ELVKALEQFENLQGFLEHVSLIMDNESDDTEEKVSIMTLHAAKGLEFPAVFLPGWEDGLF
PSQRSMDESGQVGVEEERRLAYVGITRAEEVCTISFAGNRRVFGQWQSALPSRFIDELPE
AHVEVLTPPGLYGGGYGAAGMGGVQSSIDARVAEANVYNSPGWKRLQARAGQRPVAQPGE
ARNTVIDMKAVSSHSVGERVFHQKFGYGAIIGIEGDKLEIDFEKAGTKKVVARFISAADD
IPF
NT seq
2352 nt
NT seq
+upstream
nt +downstream
nt
atgagcagttatgacgaatccgacgcctttgaaggcgcatcgctggccgcgcgggcaatg
gccgcccgtggcgcgccatatttggacgaactgaacccggcgcagcgggccgcggtcgag
gcgctggatggtccggtcctgatgctggcgggggccggcaccggcaagaccaaggcgctg
accgcacggatcgtgcatctgctgaacaccgggcgggcgcgcccgaacgagatcctgtcg
gttacgttcaccaacaaggccgcgcgcgagatgaaagatcgcgttggccgcctgttgggg
cagagcatcgaggggatgccgtggctgggcacctttcattcgatttgtgtcaagctgctg
cgccgccacgccgaactggtcgggctgaagtcgaattttaccattctggacaccgacgat
caagttcggctgatgaagcagttgattcaggctgcgggtattgatgacaagcggtggccc
gcacgcatgctggccggcattatcgacaattggaagaaccgggcatggacgcccgcgaac
ctgcccgcgtccgaggccggggcctatgacggcaaggggccgcagttatacgcgctctat
caggcgcggttgaaggaactgaacgcagtggatttcggtgatctgctgctgcatgtggtc
acgatttttcagacacatgacgatgttttgcagcagtatcagcggtggttccgctatatt
ctggtggacgagtatcaggataccaacgtggcgcagtacctgtggctgcggctattggcc
ggagcgcacaagaatatctgctgtgtcggagatgacgatcagtcgatctatggctggcgt
ggtgcagaagtaggcaatatcctgcggtttgaaaaggattttcccggcgcacatgtggtc
aggctggagcagaattaccgctcgaccccgcatattctggccgctgcctctggcgtgatc
gcgggcaacaaggggcgattgggcaaggagttgtggaccgaggccgaggagggcgagaag
gtacgcctgatcggccattgggacggcgaggaagaggcccgctggatcggcgaagaaatc
gaggcgatgcagggcggcacgcgtgggatgcgtcccatccgccgggatgaggtggcgatc
ttggtacgcgcgtcccaccagatgcgcgcgttcgaggatcggtttctgaccatcggatta
ccttatcgggtgatcggcggaccgcgcttttatgagcggatggagattcgcgacgcgatg
gcctatttccgcgttgtgaccagcccgagcgatgatctggcattcgagcggatcgtgaac
acgcccaaacgcgggctgggtgacaaagcgcaacaaaccatccagcggattgcccgcgcc
aatggtgtgccgctggtccagggcgcggcactggcggtcgagcagggcgagatcaagggt
aagggtggcaccgagttggcgcgtctgctggacggtctgacgcgctggggccggttgatc
ggggatgctagtgtcagccatgtcgagttggccgagatgatcctagatgagagcggctat
accggcatgtggcaaaacgacaagacgcccgaggcgcccggtcggctggagaacctcaag
gaattggtcaaggcgctggagcagttcgagaacctgcaagggtttctggagcatgtcagt
ctgatcatggacaacgaaagcgatgatactgaggaaaaagtcagcatcatgacgctgcac
gcggccaaggggctggaatttcccgccgtgtttctgccgggctgggaggatgggctgttt
ccgtcgcagcggtctatggacgagagcggccaagtgggcgtcgaggaagaacggcggctg
gcctatgtcggtatcacgcgggccgaagaagtctgtaccatctcatttgcgggcaaccgg
cgggtgttcggccaatggcagtccgcgttgccgtcgcgtttcatcgatgagttgcctgag
gcacatgtggaggtgctgacgcctccgggcctctatggtggtggctatggcgcggcgggg
atggggggcgtgcagagcagcattgatgcgcgggtcgccgaggccaacgtttacaattcc
cccggctggaaacgcctgcaggcgcgcgccgggcagcggcctgtggcgcaacccggcgag
gcgcgcaataccgtgatcgacatgaaggcggtcagttcccacagcgtcggcgagcgcgtg
tttcatcagaaattcggttatggcgcgatcatcgggatcgaaggcgacaagctggaaatc
gactttgaaaaggcgggtaccaagaaagtcgtggcccggtttatttctgcggcggatgat
atcccgttttaa
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integrated database retrieval system
