Roseovarius pelagicus: N7U68_01565
Help
Entry
N7U68_01565 CDS
T09340
Symbol
rnd
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
rpel
Roseovarius pelagicus
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpel03016
]
N7U68_01565 (rnd)
Enzymes [BR:
rpel01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
N7U68_01565 (rnd)
Transfer RNA biogenesis [BR:
rpel03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
N7U68_01565 (rnd)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
Motif
Other DBs
NCBI-ProteinID:
UXX83401
LinkDB
All DBs
Position
91032..92189
Genome browser
AA seq
385 aa
AA seq
DB search
MQTLTTTDALAAFCKEAAGYPYVTVDTEFLRERTYYSKLCLVQLAMPGEGDENAVLVDPL
AEGLSLEPLYELFRDEAVVKVFHAARQDLEIFFVDAGLIPSPLFDTQVAAMVCGFGEQAG
YETLVRRIAKQQLDKSSRFTDWSRRPLSDAQKTYALGDVTHLRKIYEYLAKQLEKSGRDK
WVAEEMAVLNDPATYVTRPEDAWMRIKTRNNSGKFLAIVRELARFREAHAQARDIPRNRV
FKDDALVELAATKPASVQDLGRSRLLLREARKGDIAEGILAAVAAGIAVPPEHQPKPDTS
RDKMQVNPAIADLLRVLLKGISDREGVASKLIATASDLDAIAAGHRDAVALKGWRREVFG
DEALRLCAGEIALRVKGSAIETVAV
NT seq
1158 nt
NT seq
+upstream
nt +downstream
nt
atgcaaacactcaccaccaccgacgcgctggccgctttttgcaaagaggccgccgggtac
ccctacgtgaccgtcgacaccgaattcctgcgtgagcgaacctattattccaaactgtgt
cttgtgcagttggcgatgccgggcgagggcgacgagaatgcggttctggtcgatccactg
gcagaaggcctgtcgctggagccgttatacgagctgtttcgcgatgaggcggtggtcaag
gtgtttcacgccgcgcggcaggatctggagatattctttgttgatgcggggctgatcccc
tcgccgctctttgacacgcaggtggcggcgatggtctgtggctttggcgagcaggcagga
tacgagaccttggtgcggcgcattgccaagcagcagctggacaaatcctcgcgctttacc
gactggtcgcggcggccattgtcggatgcgcagaagacatatgcgctgggggatgtgacg
catctgcgcaagatctatgaataccttgccaagcagctggaaaagagcgggcgcgataaa
tgggtggcagaagagatggctgtgctcaacgatccggccacgtatgtgacccgccccgag
gacgcgtggatgcggatcaagacgcgcaataattcgggcaagtttctggccatcgtgcgc
gaattggcccggttccgcgaggcccatgcccaagcacgggacatcccgcgcaaccgtgtg
ttcaaggatgatgcactggtggaactggccgcgaccaagcccgccagcgtgcaggatctg
gggcgctctcggttgctgctgcgcgaggcccgcaagggggatatcgccgagggcatactg
gcggcagtggccgcagggatagcggtgccgcccgagcaccaacccaagccggataccagc
cgcgacaagatgcaggtcaacccagcgatcgccgatctgttgcgggtcttgctcaaaggc
atttccgaccgcgaaggcgtggcgtccaagttgatcgccacggcgtcggatctggatgca
atcgcagccgggcatcgcgacgccgtggcattgaagggctggcgtcgcgaagtgttcggc
gacgaggcattgcggctatgtgcgggcgagatcgcgttgcgcgtcaagggcagcgcaatc
gagacggtggctgtctag
DBGET
integrated database retrieval system
