KEGG   Roseovarius pelagicus: N7U68_03000
Entry
N7U68_03000       CDS       T09340                                 
Name
(GenBank) sigma-54 dependent transcriptional regulator
  KO
K13599  two-component system, NtrC family, nitrogen regulation response regulator NtrX
Organism
rpel  Roseovarius pelagicus
Pathway
rpel02020  Two-component system
Brite
KEGG Orthology (KO) [BR:rpel00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    N7U68_03000
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02022 Two-component system [BR:rpel02022]
    N7U68_03000
Two-component system [BR:rpel02022]
 NtrC family
  NtrY-NtrX (nitrogen regulation)
   N7U68_03000
SSDB
Motif
Pfam: Sigma54_activat Response_reg Sigma54_activ_2 HTH_8 AAA_5 FleQ cREC_REC AAA_2 AAA_16 AAA MCM VpsR
Other DBs
NCBI-ProteinID: UXX83659
LinkDB
Position
complement(405835..407244)
AA seq 469 aa
MNDILIVDDERDIRELISDILEDEGYSTRLAGNSDDAMAAIAEQPPALLILDIWLKDSNM
DGIDILKAVKRDYPDVPVVIISGHGNIEIAVAAIKQGAYDFIEKPFNIDQLMVVIRRGME
TSRLRRENQSLKRRETGPADMLGESSVFRSLVSQLDKVTRSNGRVMLTGPAGSGKELAAR
YIHVNSNRADAPFISVGCASIEAERMEEVLFGRESEDRGIEPGLLEEASGGVIYFDEVAD
MPPGTQSKILRVLVDQQFLRVGGSEKVQVDLRVISSTSHDLETEIAADRFRRELFHRLNV
VPISVPSLEERRDDIPLLANYFIEMLNKTQGLPLRKLSGEANALLQTMPWPGNVRQLRNM
VERVLILGEGTGDIETQELPGESAVGPDDGRVVLAGALATMPLREAREAFEREYLLTQIN
RFGGNISRTAEFVGMERSALHRKLKSLGVVTSAKSGARVAKIAEEEADE
NT seq 1410 nt   +upstreamnt  +downstreamnt
atgaacgatattctgattgtagacgacgagcgtgatattcgtgagctgatctcggatatt
ctggaggacgagggatattccactcggctggcggggaattcggacgacgcgatggcagcg
attgcagaacagcccccggcattgttgattttggatatctggctgaaagacagcaacatg
gatgggatcgacatccttaaggcggtgaagcgcgactatcccgatgtgccggtggtcatc
atctctggccatggcaatatcgagatcgctgtcgccgcgatcaagcagggtgcctacgat
ttcattgagaaaccgttcaacattgatcaactgatggtcgtcatacgtcgcggtatggaa
accagccgcctgcgacgcgagaaccaaagtcttaaacggcgtgagaccggcccggcggac
atgctgggcgaaagcagcgtctttcgttccttggtcagtcagttggacaaagttacacgc
tcgaatgggcgggtcatgttgaccggtccggcgggcagtggcaaggaactggcggcgcgg
tatatccatgtcaattccaaccgggcggatgcgcctttcatctcagtcgggtgcgcatca
atcgaggccgagcgcatggaagaggtgctgtttggacgtgaaagcgaagaccgcgggata
gagccgggcctgctggaagaggccagcggtggtgtgatctatttcgacgaggtggcggat
atgcctccgggtacacagtccaagattttgcgcgtactggttgaccagcaattcctgcgt
gtcggtggctcggaaaaagttcaggtcgacctgcgcgtgatcagctctaccagccatgat
ctggagactgaaattgcggccgacaggttccgccgcgagcttttccatcgcttgaacgtt
gtaccgatcagtgtgccatcgctggaagagcgtcgagacgatattcccctacttgccaac
tacttcatcgagatgctgaacaaaacgcaagggttgccactccgcaagctgagcggagag
gcaaatgcgttgttgcagacgatgccatggcccggaaacgtgcgccagttgcgcaatatg
gtcgaacgggttttgatcctaggggaaggcacaggcgatatcgagacacaggaattgccc
ggtgaaagcgccgtcggcccggacgatggacgcgtggtattggccggggcgctcgctaca
atgccgctacgcgaagcacgagaagccttcgaacgagagtacctgctgacacagatcaac
cggtttggaggaaatatcagccgcaccgctgagttcgtcggaatggagcgcagcgcacta
catcgcaagctgaaatcgctgggcgtggtcacgtcggcaaaatccggcgcgcgcgtggcc
aagattgcagaggaggaggcggacgaatag

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