Roseovarius pelagicus: N7U68_03465
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Entry
N7U68_03465 CDS
T09340
Name
(GenBank) ABC transporter substrate-binding protein
KO
K02035
peptide/nickel transport system substrate-binding protein
Organism
rpel
Roseovarius pelagicus
Pathway
rpel02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N7U68_03465
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
rpel02000
]
N7U68_03465
Transporters [BR:
rpel02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
N7U68_03465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
UXX83739
LinkDB
All DBs
Position
499368..500849
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AA seq
493 aa
AA seq
DB search
MRFLATALALCLCLPAAADPTGTFRQAHELGFGALSNLDPMSNGRVLQVTEKTMNRLVRP
GADGTPQPVLATDWQPNEDGTEWTFTLREGVRFHDGTDFDAADVVYSLNRIIAPDNDSSA
RATIQMIHRIEAVGPYEVRMYLDGPFADLPLQLMDFRMRIIPDGSGDTIAQTGIGTGPFI
VERFDPDGITILRANSDYFEGPPGVAAIEVIAIPDAQARLQALLGGQIDMERGITPQLGK
VLEASDRYAVQQVPTGNWIGMAFRTDVPPYDDARIRRALRLAVDRDEMLKLVLGGRGIVA
CDTPVAPNDQYRADIACPQDIAQARALLTDAGYPDGIDVTVHVSALDSSWPTMAVVYQQQ
AAAAGIRVRIKKESTDGYWSQVWMQKDAVTTRWNERPADQALNEAFSSGAKWNETYYKDA
VFDQLMTDARSELDFDQRRALYEAAQIRLWENAGTLIPYHVTQLVGLSARVANLDNVKND
AVRWHLIRVIPDS
NT seq
1482 nt
NT seq
+upstream
nt +downstream
nt
atgagattcctcgccacggcccttgccctctgtctttgcctgcccgcggcggcggatcca
acaggcacttttcggcaggcgcatgagttgggtttcggcgcgctgagcaatcttgacccg
atgtccaacggacgggtccttcaggtcaccgaaaaaaccatgaaccgccttgtgcggccc
ggtgccgacggcacaccacagccggttttggccacggattggcagcccaatgaggacggc
accgaatggaccttcaccctgcgcgaaggtgtgcggtttcacgacggaaccgactttgac
gccgccgatgtggtctattccctgaaccggattattgcgcctgacaatgacagttcagcc
cgcgccaccatccagatgattcaccggatagaggcggtcggcccgtatgaggtacgcatg
taccttgatgggccgtttgcggacctgccgctgcaactgatggattttcgcatgcggatc
atccccgatggttcaggcgataccattgcacagaccggaatcggcacgggcccgttcatt
gtcgagcggtttgaccccgacggcattaccattctacgcgcgaattccgattatttcgaa
ggtccccccggcgttgccgccatcgaagtaattgcgatccccgacgcacaggcccgccta
caggcgctcttgggtggccagatcgacatggagcgcggcatcaccccgcaattgggtaag
gtgctggaggcatccgatcgctacgccgtgcaacaagtccccaccggcaactggatcggc
atggcttttcgcaccgacgtacccccatatgacgatgcgcggatacgtcgtgcgcttcga
ttggccgtggaccgcgatgaaatgctgaagctggtgctgggcggacgcggaatcgtcgcc
tgcgacacccccgttgcccccaacgatcagtatcgggcggacatcgcttgtccgcaggat
atcgcccaagcacgcgcgctgctgaccgatgcgggttacccggacggcattgacgtgaca
gtgcatgtctcggcgctcgatagcagttggccaacgatggcagtggtctatcaacaacag
gccgccgcggcgggcatccgcgtcaggatcaagaaggaatcaactgacggttactggagc
caagtctggatgcaaaaggacgcggtgacgacccgctggaacgaacgccccgctgatcaa
gcgctgaacgaagcattctcctcgggtgccaaatggaacgagacctactacaaagacgcg
gtttttgatcagttgatgacagatgcacgttccgaactggactttgatcagcgccgtgcg
ctgtatgaggcggcgcaaatacggctatgggagaatgccggcacgcttatcccctaccat
gtgacccaattggtggggctgtcagcccgcgttgccaacctcgataacgtcaagaatgac
gcggtgcgctggcacctgatccgggtgatcccggacagttga
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