Roseovarius pelagicus: N7U68_06925
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Entry
N7U68_06925 CDS
T09340
Symbol
rimO
Name
(GenBank) 30S ribosomal protein S12 methylthiotransferase RimO
KO
K14441
ribosomal protein S12 methylthiotransferase [EC:
2.8.4.4
]
Organism
rpel
Roseovarius pelagicus
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpel03009
]
N7U68_06925 (rimO)
Enzymes [BR:
rpel01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.4 Transferring alkylthio groups
2.8.4.4 [ribosomal protein uS12] (aspartate89-C3)-methylthiotransferase
N7U68_06925 (rimO)
Ribosome biogenesis [BR:
rpel03009
]
Prokaryotic type
ribosomal protein modification factors
N7U68_06925 (rimO)
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Radical_SAM
TRAM_2
UPF0004
TRAM
YajR_YAM
CLP1_P
Motif
Other DBs
NCBI-ProteinID:
UXX84371
LinkDB
All DBs
Position
1213805..1215184
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AA seq
459 aa
AA seq
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MSTNPPDLRPDLARATLTGSATRRSGQPTIGMVSLGCPKALVDSERILTRLRAEGYAISP
DYTGADAVIVNTCGFLDSAKAESLEAIGEALDENGRVIVTGCLGAEPDYITGAHPRVLAV
TGPHQYEQVLDAVHAAVPPDPDPFVDLLPASGVSLTPRHYSYLKISEGCNHKCKFCIIPD
MRGRLASRPAHAVLREAEKLVENGVRELLVISQDTSAYGVDIKHAETNGHRAHITDLARD
LGSLGAWVRLHYVYPYPHVRKLIPLMADGLVLPYLDIPFQHAHPDVLRRMARPAAAAKTL
EEIAAWRSICPEITLRSTFIVGYPGETESEFQTLLDWLDEAQLDRVGCFQYENVDGARSN
ALPDHVPDDVKQDRWDRFMEKAQAISVDKLAAKVGSIQQVIVDDIDEDGIATCRTKADAP
EIDGNLFIDDGTDGLSVGDIVEVEVDEAGEYDLWGALRR
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgagcacaaaccctcctgatctgcgtcccgatctggcacgcgccacgttgaccggcagc
gccacgcgccgcagcggtcagccaaccattggcatggtcagcctcggctgtccaaaggca
ttggtggactcggaacgcatcctgacgcggctgcgcgccgaaggctatgcgatatcgccc
gattataccggtgcggacgcggtgatcgtcaatacctgtggtttcctcgacagcgccaag
gccgagagtctggaggccatcggcgaggcgctggatgaaaacgggcgggtgatcgtcact
ggctgcctcggggcggaaccggattacatcaccggcgcgcatccccgcgtgctggctgtg
accggcccgcaccagtatgagcaggtgctggatgccgtacacgccgccgtgccgcccgat
cccgatccctttgtcgacctgctgcctgcctccggcgtcagcctgacgcctcgccattac
tcttatctaaagatttcagagggatgcaatcataagtgcaagttttgcatcatcccggat
atgcgcggccgtctggccagccgccctgctcacgccgtgttgcgcgaggccgagaagctg
gtcgaaaacggcgtgcgcgagctgctggtgatttcacaggatacttcggcctacggggtt
gatatcaaacatgccgagacgaacggccaccgggcccatatcaccgatctggcgcgtgat
ctggggtcgctgggcgcatgggtccggctgcactatgtctatccctatccgcatgtgcgc
aaacttatccctttgatggccgacgggctggtgttgccttatcttgatattccattccag
catgcccaccccgacgtcctgcgccggatggcccgccctgcggcggcggccaaaacgctt
gaagagattgccgcatggcgttcgatttgcccggaaatcactctgcgcagtacgtttatc
gtcggctatcccggagagaccgagtcagagtttcagaccttgctggactggttggacgag
gcgcaactcgaccgggttgggtgttttcaatacgaaaacgtcgacggtgcgcgttcgaac
gctttgccggaccatgtgcccgatgatgtaaagcaagatcgctgggatcggtttatggaa
aaagcgcaggctatttctgtggataaactagctgccaaggttggctccatccaacaagtc
attgtcgatgacatcgacgaagacggcatcgccacctgccgcaccaaggcggacgccccc
gaaatcgacggcaatctgttcatcgacgatggcaccgatgggctaagcgtcggcgatatt
gtcgaggtcgaagtggatgaggccggtgagtatgatctgtggggtgcgctgcgtcgatag
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