Roseovarius pelagicus: N7U68_10305
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Entry
N7U68_10305 CDS
T09340
Symbol
mrdA
Name
(GenBank) penicillin-binding protein 2
KO
K05515
penicillin-binding protein 2 [EC:
3.4.16.4
]
Organism
rpel
Roseovarius pelagicus
Pathway
rpel00550
Peptidoglycan biosynthesis
rpel01100
Metabolic pathways
rpel01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
N7U68_10305 (mrdA)
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
N7U68_10305 (mrdA)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpel01011
]
N7U68_10305 (mrdA)
Enzymes [BR:
rpel01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
N7U68_10305 (mrdA)
Peptidoglycan biosynthesis and degradation proteins [BR:
rpel01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
N7U68_10305 (mrdA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
Motif
Other DBs
NCBI-ProteinID:
UXX84999
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Position
1855157..1857097
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AA seq
646 aa
AA seq
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MRRPGRETILSHKRISRRGLILGAGQAGFLGLLGWRMRYLQVEEADQFRLLAEENRIKIR
LIPPARGEIFDRNGRVVAENVPSYRIMMEREEAGDVEAIIARLSQLIELDPDELNRAREE
MRRSALHPVTIADRVSWEALSRVAVNAPALPGVRPEVGLSRRYPLRDEYAHLVGYVGPVS
DYDLEKIDAPDQLLLIPRFQIGKVGLEKQREDMLRGKAGTKRVEQNAAGRVMRELSRREG
QPGKDIQITTDSALQSYVHARLSGESAAAVVIDCETGDILASVSAPGFDSNLFVRGISVA
DYQALLDNKYRPLPNKAVQGVYPPGSTFKMVTALAAMEDGQAQPDDTVYCPGHLEVSGRK
FHCWKRAGHGNVDLQRALRESCDVYFYEMALRTGIEKITAMANRLGLGVQHDLPMTSVAQ
GLMPTKDWKRSARGQEWVIGDSVNSSIGQGFTLASPLQLAVMTARIATGRTVDPRLIKSI
DGIETPTGRGDSLGLNENNLRQIRRAMFEVSNNRRGTAYRSRIVEDAFRMAGKTGTSQVR
NITAAERAAGVVRNEDLPWERRDHALFVNFAPFDAPKIAVSVVVEHGGGGSTAAAPIARD
ITLQALYGKDPPLEAYPSSDRPRIRTQQEKLREDQLSRAETNGDRA
NT seq
1941 nt
NT seq
+upstream
nt +downstream
nt
atgagacgtccgggacgcgaaacgatcctcagtcacaaacggatcagccgccggggtttg
attctcggggcgggacaggccggatttctggggctgctgggctggcgcatgcgttacctt
caggtcgaggaagcagatcaattccggcttctggccgaagagaaccggatcaagattcgt
ctgatcccgcctgctcgtggggagattttcgaccgcaatggtcgggttgtggccgaaaac
gtcccatcctaccggattatgatggagcgtgaagaagccggagacgtcgaggcaatcatt
gcccggctgtcacaactgattgagcttgacccggatgaattgaaccgcgcgcgcgaagaa
atgcgacgttcggccctgcatcccgtcaccatcgccgaccgcgtaagctgggaggcactg
agccgtgtcgcggtcaacgcacccgcactccccggtgtgcgacccgaagtgggtctgtca
cgccgttatccgctgcgcgacgaatatgcgcatctggtcggctatgtcggcccagtcagc
gactatgatctcgaaaagatcgacgctcccgatcaactgttgctgatcccgcgttttcag
atcggcaaggtcgggctggaaaagcagcgcgaggacatgctgcgcggcaaggctggcaca
aagcgggtcgagcaaaatgctgcagggcgcgtcatgcgcgaactcagccgccgcgaaggc
cagccgggtaaagatatccagatcaccaccgacagcgcgttgcaatcctatgttcatgcc
cgcctcagcggtgaaagcgccgctgcggtggtaattgactgcgagaccggggatattctg
gccagcgtttctgcgcccggttttgattccaacctgttcgtgcggggcatttcggtcgct
gattatcaggcgctactcgataacaagtatcgccccctgccaaacaaggcagtgcaaggt
gtctatccgcccggatccaccttcaaaatggttacagcgctggcggcgatggaggacggg
caggcgcagccggatgataccgtctattgtcctggtcaccttgaggtcagcggtcgcaag
ttccactgctggaaacgtgcggggcatggcaatgtcgatctgcaacgagcattgcgtgaa
agttgcgatgtctatttttacgaaatggcgctgcgaacagggatcgaaaagatcacggca
atggcaaaccgccttggcctcggggtgcagcatgatctgccgatgacaagcgttgcgcag
ggcctgatgccaaccaaggactggaaacgcagcgcccgtgggcaggagtgggtgattggc
gacagtgtgaactcgtccatcggccaaggcttcacgctggcctcacctctgcaactggcc
gtgatgactgcgcgcattgcgacaggccgaaccgttgaccctaggctgatcaaatccatc
gatggcatcgaaacccctaccggacgcggtgattcactgggcctgaacgaaaacaacctg
cgtcaaattcgccgcgcgatgttcgaggtttccaataatcgccgtggcacggcctatcgc
agtcgtatcgttgaggatgcatttcgcatggccggcaaaactggcaccagtcaggtccgc
aacatcacagccgcagaacgggccgctggcgtcgtgcgcaacgaagatttgccgtgggag
cggcgtgatcatgcgctctttgtcaatttcgcgccgttcgacgcaccaaaaatcgctgtg
tcggtcgtggtcgagcatggtggtggcggatccaccgcagcagcaccgattgcgcgtgat
atcacgctacaggcgctctatggtaaggatccaccgttagaggcctacccaagcagtgac
cgcccacgcattcggacgcagcaagagaaattgcgcgaagatcaattgagccgggccgag
acaaacggggatcgggcgtga
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