Roseovarius pelagicus: N7U68_12095
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Entry
N7U68_12095 CDS
T09340
Symbol
addA
Name
(GenBank) double-strand break repair helicase AddA
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
rpel
Roseovarius pelagicus
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpel03400
]
N7U68_12095 (addA)
Enzymes [BR:
rpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
N7U68_12095 (addA)
DNA repair and recombination proteins [BR:
rpel03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
N7U68_12095 (addA)
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PDDEXK_1
AAA_30
DEAD
DUF3638
Motif
Other DBs
NCBI-ProteinID:
UXX81864
UniProt:
A0ABY6D7H3
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All DBs
Position
2227904..2231284
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AA seq
1126 aa
AA seq
DB search
MTRDAATQRQIAAARPDRSTWLAANAGSGKTKVLTDRVARLLLDGVDPQHILCLTYTKAA
ASEMQNRLFRRLGKWAMLGDAQLTTELNDLGLDGPLPDEALRNARRLFAMAVETPGGLKI
QTIHSFCAGLLRRFPLEAGVSPNFSEMEDRAAALLRAEIVEGIAAGPEADKLAAVARHYS
GDSIADLAQEIAGKQSLIQHEWTDAGLRRVLGLRDHQTRDWLRDSVYLGGEQEILATLLP
ALRAGTSTDQKNAEKLAAINTLDLAALSTLEGVFLSGKGTDPPFAAKIGTRQDFPTKKTT
QALGDTAAPLHEWMRRVETARETRVALDALDAAHALHDFAHVFLAAYAEAKQRRSWLDFD
DLILKAVNLLTRRDVTAWVLFRLDGGIDHILLDEAQDTSPEQWQVIARLAQEFTSGIGSR
PNDRRTIFVVGDKKQSIYSFQGADPREFDRMQAEFAERLGATPDPLQSHRLEHSFRSSQV
ILDLVDQVFAKVVQPEGLSLDAHHLAFKTDLPGRVDLWPVPEPEQAIDDPAWHDPVDVVA
GNDPAVSLAAQIAQSISDMIDTGQPIPTGEGTTMRPVRAGDVLILVQGRSQLFHEIIRAC
KARNLPIAGADRLRVAGELAVRDLAALLSFLATPEDSLALATALRSPLFGWSETQLHALA
QPRTQPYLWPALRLRADEFPETMTILNDLRAQVDYLRPYDLIERILTRHSGRRRLLSRLG
PEAEDGIDALLSQALAYEQKAVDSLTGFLVWLETDDLEIKRQMDSAGNRIRVMTVHGAKG
LESPIVILPDTGERNTPMRGQITVSDDIPLWRMTADNVPARIRDAVDLAKSAEEAERDRL
LYVAMTRAETWLIVACAKPPGKNGKSWYEKIAAGMTASGAFTYSFDDADGLRMETGNWAA
TETVVEPETIIVTAELSAFFGDPVSEIPSRPTALSPSDLGGAKALPGEAGLDEDAAKRWG
RQVHLLLEVLPDVPHDIWPAIVAQMLSTGPDRADATTQAALLSEVENVLTATDLTVLFQP
AALVEVPITASLPELGGRRLHGIIDRMILGTDRILIVDFKTNRVVPDSPAACPIGLLRQM
GAYAAAVRQIYPGKPVDTALLWTRTAQMMMLPHDLVTEAVTTTSIP
NT seq
3381 nt
NT seq
+upstream
nt +downstream
nt
atgacacgcgacgccgctacacagcgccagatcgctgccgcccggcccgaccgatctact
tggttggcggccaacgctggatcgggcaaaaccaaggtactgaccgaccgcgtggcgcgg
ctattgctggatggtgtcgatccgcagcatattctgtgtctgacctacaccaaggccgcc
gcaagcgagatgcaaaaccgactgtttcggcgtttggggaaatgggcgatgctgggggat
gcccagctgaccacagagctgaatgacctcgggttggacgggccactgccagacgaggcg
ctgcgcaatgcgcggcgtctgttcgccatggcagtcgaaacgccgggcgggttgaaaatc
cagaccatccactcgttctgtgcgggtcttttgcgtcgttttccactggaggccggtgtc
agcccgaatttctccgagatggaagatcgcgcggcagccttgttgcgggcggaaatcgtt
gaagggatcgccgccgggccggaggccgacaagctggcagccgtggcgcgacactatagc
ggtgatagtatcgccgatctggcacaagagattgctggaaaacagagcctgatccagcat
gaatggaccgacgcggggcttcgtcgtgttctgggtttgcgcgaccaccaaacccgagac
tggctgcgcgattctgtctatctgggtggcgaacaggaaattctggccactctgctgcct
gcattgcgggccggtacgtctaccgatcagaaaaatgccgaaaaactggcggcgatcaac
acgcttgatttggcggcactgtcgaccctcgagggggtttttctgtcaggcaagggaacc
gacccgccctttgccgccaagattggcacgcgtcaggacttcccgaccaagaaaaccaca
caggcgcttggcgatactgctgcaccactacatgagtggatgcgccgggtcgaaacagca
agggagacgcgcgtcgcgctcgacgcgctcgacgcagcccacgcgctgcacgattttgct
catgtgtttctggccgcctatgcggaggccaaacagcgacgcagttggctagattttgat
gatctgatcctgaaggcggtcaacctgctgacacgtcgagatgtcaccgcatgggtatta
ttccgtttggatggaggcatagaccatatcctgctggatgaggcacaggataccagcccg
gaacaatggcaagtcattgcgcgtctggcgcaggagtttaccagcggcatcggatcgcgc
cctaacgaccggcgaacgatctttgtcgtaggggacaagaaacagtcgatctattccttt
cagggggccgacccgcgcgagtttgaccggatgcaagccgagtttgccgaacggttgggg
gccacgccggatccgctgcaatcgcatcggctggaacattcattccgctcttcacaggtg
atcctcgatctggttgatcaggtattcgcaaaggtcgttcaacccgaaggattatcgctt
gatgcacaccatctggcgttcaagaccgatttgcccggtcgcgttgatctatggcccgtg
cccgaaccagaacaggccatcgacgatcctgcatggcatgatccggtcgatgtggtcgct
ggcaacgatccggctgtatctctggcggcccaaatagcacaaagcatttcagatatgatc
gacacggggcagcccatcccgaccggcgagggcacgacgatgcgcccggtccgggcaggt
gatgtgctgatccttgttcagggacgttcacagctatttcacgagattattcgcgcctgc
aaggcccgcaacctgcccatcgccggcgcggacagactgcgggtagcgggtgaactggcc
gtacgcgatttggcggcattgctatcgtttcttgctacacccgaggacagtctggcgctc
gccaccgcattgcgctcgccactctttggctggagcgagacgcaattgcacgcattggcg
cagccgcgcacacagccctatttatggccagcattgcgcctgcgcgcagatgaattcccc
gaaacgatgacaatcctcaatgatctgcgcgcccaagtggattatctgcgcccctatgac
ctgatcgaacgtatcctgacacgccattcgggccgacgcaggctgttgtcacgcctcgga
cccgaggccgaggatggcatcgacgcgctgctcagtcaggcactcgcctacgaacaaaag
gcggtggacagcttgacgggctttctggtctggctggaaaccgatgatcttgaaataaaa
cgtcagatggacagcgcaggaaaccgcattcgggtgatgacggtccatggcgcaaaaggg
ctggagtcaccgattgttatcctgccggatacgggcgaacgcaacacgccgatgcgcggc
cagatcacggtatctgacgacatccccctctggcgtatgacagccgataacgtccccgcc
cggatacgcgacgctgttgatctggcaaaatcagcagaagaagccgagcgtgatcgcctg
ctctatgtggccatgacacgggcagaaacctggctgattgtcgcctgcgccaagccaccg
ggcaagaacggcaagagctggtacgagaagattgccgctggaatgaccgcaagcggagcg
tttacctacagctttgatgatgcggatggattgcggatggaaacagggaattgggctgca
acagagactgttgttgaacctgaaacgataattgtcaccgccgagttgtctgcatttttc
ggcgatcctgtttccgagattccgtcgcgacccaccgcccttagcccatctgatctgggc
ggggccaaagctctgcccggcgaggctgggctggacgaggacgccgccaaacgctggggc
cgccaggtacatctgttgctagaggttctgccagacgtgccgcatgatatatggcccgca
attgtggcgcaaatgctgagcaccggaccggaccgggctgatgccaccacgcaagcggcc
ctcctgtcggaagtggaaaacgtgctgacagccacggatttgaccgtgctatttcagcct
gccgcgctggtcgaagtgccgattaccgcatcgctgccggagttgggcggcagaaggctg
catggtattattgaccggatgattctgggcaccgatcgcattctgatcgtcgatttcaaa
acaaaccgcgttgtgcctgacagcccggcggcctgccccattggtctgctgcggcaaatg
ggggcctatgccgcagcggtacggcagatctatcccggtaagcccgtcgataccgcatta
ttgtggacgcgcacagcacagatgatgatgctcccacacgatctagtaacagaagccgtc
acgaccacttcaataccttga
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