Roseovarius pelagicus: N7U68_16260
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Entry
N7U68_16260 CDS
T09340
Symbol
groL
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpel
Roseovarius pelagicus
Pathway
rpel03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
N7U68_16260 (groL)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpel03019
]
N7U68_16260 (groL)
03110 Chaperones and folding catalysts [BR:
rpel03110
]
N7U68_16260 (groL)
03029 Mitochondrial biogenesis [BR:
rpel03029
]
N7U68_16260 (groL)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpel04147
]
N7U68_16260 (groL)
Enzymes [BR:
rpel01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
N7U68_16260 (groL)
Messenger RNA biogenesis [BR:
rpel03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
N7U68_16260 (groL)
Chaperones and folding catalysts [BR:
rpel03110
]
Heat shock proteins
HSP60 / Chaperonin
N7U68_16260 (groL)
Mitochondrial biogenesis [BR:
rpel03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
N7U68_16260 (groL)
Exosome [BR:
rpel04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
N7U68_16260 (groL)
Exosomal proteins of other body fluids (saliva and urine)
N7U68_16260 (groL)
Exosomal proteins of breast cancer cells
N7U68_16260 (groL)
Exosomal proteins of colorectal cancer cells
N7U68_16260 (groL)
Exosomal proteins of bladder cancer cells
N7U68_16260 (groL)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
ChlI
Knl1_RWD_C
Motif
Other DBs
NCBI-ProteinID:
UXX82624
LinkDB
All DBs
Position
3080984..3082630
Genome browser
AA seq
548 aa
AA seq
DB search
MAAKDVKFDTDARNKMLRGVNILADAVKVTLGPKGRNVVLDKSFGAPRITKDGVSVAKEI
ELEDKFENMGAQMVKEVASRTNDEAGDGTTTATVLAQAIVKEGMKSVAAGMNPMDLKRGI
DLATAKVVEAIKAAARPVSDSAEVAQVGTISANGEAEIGQQIADAMQKVGNEGVITVEEN
KGLETETDVVEGMQFDRGYLSPYFVTNPDKMVADLEDCIILLHEKKLSSLQPMVPLLEQV
IQSQKPLLIIAEDVEGEALATLVVNKLRGGLKIAAVKAPGFGDRRKAMLQDIAILTGGQV
ISEDLGMKLESVTMDMLGSAKKITITKDETTIVDGAGEKAEIEARVAQIRNQIEETTSDY
DREKLQERVAKLAGGVAVIRVGGMTETEVKERKDRVDDALNATRAAVQEGIVVGGGVALV
QAGKTLEGMTGDNNDQTVGIGIVRKALEAPLRQIAENAGVDGSVVAGKIRESSDAKFGFN
AQTEEYGDMFKFGVIDPAKVVRHALQDAASIGGLLITTEAMVADKPAKEGAGGAGGGMPD
MGGMGGMM
NT seq
1647 nt
NT seq
+upstream
nt +downstream
nt
atggctgctaaagacgtcaaattcgataccgatgcccgcaacaaaatgctgcgcggcgtg
aacatcctggccgacgcggtcaaggttacgctgggccccaaaggccgcaacgtggttctg
gacaagtcgttcggcgcaccgcgcatcaccaaagacggtgtgtcggttgccaaagagatc
gagctggaagacaagttcgagaacatgggcgcgcagatggtcaaagaagtggccagccgc
accaatgacgaagccggcgacggcaccacgaccgcgacggttctggctcaggccatcgtc
aaggaaggcatgaaatcggttgcagcgggcatgaacccgatggacctgaagcgcggtatt
gatctggcgacggcgaaagttgtcgaagcgatcaaagctgcagcacgtcccgtttcggac
agcgccgaagttgcccaagttggcaccatctcggcaaatggcgaagcagaaatcggtcag
caaatcgcggacgcgatgcagaaagtcggcaacgagggtgtcatcaccgtcgaagaaaac
aaaggtctggaaacagagaccgatgttgtcgaaggcatgcagttcgaccgtggctacctg
agcccctatttcgtgaccaacccggacaagatggttgcagacctcgaagactgcatcatc
ctgctgcacgagaaaaagctctcgtcgctgcagccaatggttccgctgctggagcaagtt
atccagtcgcaaaaacctttgctgatcattgctgaagacgtcgagggcgaagcactggcc
actctagtcgtcaacaagctgcgcggcggcctgaaaatcgctgctgtcaaagcgcctggt
ttcggcgatcgccgcaaagccatgctgcaggacatcgcaattctgaccggcggtcaggtc
atcagcgaagatctgggcatgaagctggagtccgtcacgatggacatgctgggttcggct
aagaaaatcaccatcaccaaagacgaaacaaccatcgttgacggtgcgggcgaaaaagcc
gagatcgaagcgcgcgtcgcacagatccgcaaccagatcgaagaaaccaccagcgactat
gaccgtgagaagctgcaagaacgcgttgccaaactggcaggtggtgttgctgttatccgc
gttggcggcatgaccgaaaccgaagtcaaagagcgtaaagaccgtgtcgatgacgcgctg
aacgcgacccgcgctgccgttcaagaaggtatcgtggtcggcggcggtgttgccctcgtg
caagcgggcaaaacgctcgaaggcatgaccggtgacaacaacgatcagactgttggtatt
ggcatcgtccgcaaggcgctggaagcgccgctgcgccagatcgctgaaaacgcaggtgtc
gacggttccgttgtcgcaggcaaaattcgcgaaagcagtgacgccaagttcggcttcaac
gcgcaaaccgaagaatatggcgacatgttcaaattcggtgtgattgaccctgccaaagtg
gtgcgtcacgcgctgcaggatgcggcctcgatcggtggtcttctgatcacgaccgaagca
atggttgccgacaagcctgccaaagaaggtgccggcggtgccggtggcggcatgcccgac
atgggcggcatgggcggcatgatgtaa
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