Roseovarius pelagicus: N7U68_16875
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Entry
N7U68_16875 CDS
T09340
Symbol
secD
Name
(GenBank) protein translocase subunit SecD
KO
K12257
SecD/SecF fusion protein
Organism
rpel
Roseovarius pelagicus
Pathway
rpel02024
Quorum sensing
rpel03060
Protein export
rpel03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
N7U68_16875 (secD)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
N7U68_16875 (secD)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
N7U68_16875 (secD)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
rpel02044
]
N7U68_16875 (secD)
Secretion system [BR:
rpel02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
N7U68_16875 (secD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SecD_SecF_C
SecDF_P1_head
SecD_1st
Sec_GG
MMPL
SecD-TM1
ACR_tran
DUF6484
Motif
Other DBs
NCBI-ProteinID:
UXX82739
UniProt:
A0ABY6D9B4
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All DBs
Position
3200986..3203619
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AA seq
877 aa
AA seq
DB search
MLQIDLWKRLCIWGVVALGLLLAVPNGFYPRVEAHNDAVTAVEAGTDPSEVAADLSLWPS
WMPSGLVNLGLDLRGGAHLLAEVKVAEVYQSRLEGMWPEVRDLLRDERDSVGTIRLQPTK
GEELVVRLNERPGQVTEAATLVRGLARPVTSLTGAGASDIEVTTRGDSIVVRLSEAEKRA
TDERTVRQALEIIRRRIDEVGTREPTIQRQGSDRILIQVPGIGSAAELKAIIGTTAQLTF
QPVVSRTSNKDERAGAGNEVLPSLDDEGVYYILETAPVVTGEELVDAQPDFDQNGRPAVS
FRFNPTGARSFGDYTAENIGNPFAIVLDDEVISAPVIQSHIPGGSGIITGNFSVEESTNL
AVLLRAGALPAGLEFLEERTVGPELGADSIEAGELACIVAFVLVLAYMFLSYGIFGIFAN
IALVINVGLIFGLLSLIGATLTLPGIAGIVLTIGMAVDANVLVFERIREEMKTAKGPARA
IELGYEKALSAITDANITTFITALILFAMGSGPVRGFAITLGLGILTSVFTAIFVTRLIV
VMWFERKRPKSVLQGRALRLVPQETNWDFFRRWKLSLGLSAVLIVIAAGSFGVQGLNYGI
DFKGGTTIRTQSEQSVDIGQYRDAITPLELGDVSITEVFDPTFADDENVAMIRIQAQEGQ
EAVTPEVIVQVEEALQDAVPDIEFTSVESVGPKVSGELITTAAIAVVLAIGAVLIYIWLR
FEWQFAVGAVAALVHDVVLTIGVFSELQIQFDLAIIAALLTIVGYSLNDTVVVFDRVREN
LRKYKKLQLSEVLNLSINETLSRTMMTSVTTLLALLALYVLGGDVIRGFVFAMIWGVIVG
TYSSIFVASTILLWLGVKRDWSKPDANTGNQFANVDA
NT seq
2634 nt
NT seq
+upstream
nt +downstream
nt
atgcttcagattgacctgtggaaacgtctctgcatctggggggtggtggcccttggcctg
ttgttggccgtgcccaacggattttatccgcgggtcgaggcgcataacgacgctgttact
gccgtagaggcggggacagatccttccgaagtcgcggctgatctgtcgctctggcccagt
tggatgccatcggggttggtcaatctgggccttgatctgcgcggtggcgcacatctgctg
gccgaggtgaaggtcgcagaggtctatcaatcccgactggaaggcatgtggcccgaagtg
cgcgatttgctgcgcgacgaacgcgacagtgtcggtaccatccgcctgcaacccaccaag
ggcgaagaactggtggtgcgcctgaacgagcggcccggacaggtcaccgaggccgccacg
ctggtgcgcggtctggcgcgcccggtgaccagcctgacaggggccggtgccagcgatata
gaggtaacgacgcgcggcgatagcattgttgtccgtctgagcgaagctgagaagcgcgcg
acggatgagcgcactgtgcggcaggcgctggaaatcatccgccgccgtattgatgaggtc
ggcacacgcgaaccgacgattcagcggcaaggcagcgaccgtattctgatccaagtgccc
ggtatcggtagtgcggcagagctgaaggcgatcatcggcacgacggcgcagttgaccttt
cagccggtcgtcagccgcacgtcgaacaaggacgagcgcgcaggtgcgggcaatgaggtg
ctgccatcgctggatgacgagggcgtttactatatcctcgaaactgccccagtcgtgacg
ggcgaagagctggtcgatgcgcaacccgatttcgaccagaacggtcggccagcggtatca
ttccgctttaacccgacgggcgcgcgcagttttggtgattacacggccgagaatatcggc
aatccgtttgccatcgtgctggatgatgaagtgatcagcgccccggtgatccaaagccat
atccccggtggatcgggcatcatcaccggcaatttcagcgttgaagaaagcaccaatctg
gccgttttgctgcgtgcaggtgcgttgccggctgggctggagtttctggaggaacgcact
gtcgggccggaactgggcgcggatagcattgaggcgggtgaactggcctgcatcgtcgcc
tttgtgttggtgctggcctacatgttcctcagctatggtatattcgggatttttgccaac
attgcgctggtcatcaatgtgggcctgatctttggcctgctcagcctgattggagcgacc
ctgacattgccggggattgccgggatcgtgctgaccatcgggatggcggtggacgccaac
gtgctggtgttcgagcgtatccgcgaagagatgaagaccgccaagggaccggcgcgggcg
attgaactgggctacgagaaggcgctgagcgccatcaccgacgccaacattaccaccttt
atcaccgcgctgatcctgttcgcgatgggctctggcccggtgcgtggctttgccattacg
ctgggtctgggtatcctgacctctgtctttaccgcgattttcgtcacccgcctgatcgtg
gtgatgtggtttgaacgcaagcgtcccaaatccgtgcttcagggccgcgcattgcgcttg
gtaccgcaagagaccaattgggatttctttcgccggtggaagctgtcgctgggcctgtcg
gcggtgttgatcgtgattgccgccggatcgttcggggtgcagggcctcaactacggtatt
gatttcaagggcggcacgacgatccgcacgcagagcgaacagagtgtcgatatcggccag
taccgcgatgcgatcaccccgttggaactgggcgatgtgtcgattaccgaggtgttcgat
ccgacctttgccgacgatgaaaacgtcgcgatgatccgcattcaggcgcaggaaggccaa
gaggccgtcacgccggaggtcatcgtgcaggtcgaagaggcgttgcaggacgcagtgccg
gatattgaattcacttctgtcgaaagtgtcgggccgaaagtgtcaggcgagttgatcacc
acggcggccattgcggtcgttctggcgatcggggcggtgctgatctacatctggctgcgc
tttgaatggcagttcgccgtgggggctgtggccgccttggtgcatgacgtggtgctgacc
atcggcgtgttctctgaattacagatccagttcgatctggcgatcatcgcggcattgctg
acgattgtgggctattcgctgaacgatacggtggttgtgtttgaccgggtgcgcgagaac
ctgagaaaatacaagaagctgcaactgagcgaagtgttgaacctgtcgatcaacgagaca
ttgagccggacaatgatgacatccgtgaccacattgttggcgctgctggcgctgtacgtg
ctggggggggatgtgatccgcggctttgtctttgcgatgatctggggcgtgatcgtgggc
acgtacagctcgatttttgtggcgtcgacgattctgctgtggctgggggtcaaacgcgac
tggtccaagccggacgccaacaccggcaaccagttcgcaaacgtagatgcctga
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