Roseovarius pelagicus: N7U68_20065
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Entry
N7U68_20065 CDS
T09340
Name
(GenBank) strawberry notch family protein
KO
K26273
protein strawberry notch
Organism
rpel
Roseovarius pelagicus
Brite
KEGG Orthology (KO) [BR:
rpel00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
rpel03036
]
N7U68_20065
Chromosome and associated proteins [BR:
rpel03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
N7U68_20065
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
MTS
Helicase_C
Motif
Other DBs
NCBI-ProteinID:
UXX85315
UniProt:
A0ABY6DGZ1
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All DBs
Position
unnamed3:complement(7420..11682)
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AA seq
1420 aa
AA seq
DB search
MSKPRTANPALAISEADLASALVQIGAEVDHQPLRSSALARIMRETFHGSDAGGAWDWRI
AYDLMQAAAVQVLLRGDGAADDIAAAKLLASRLLTETRRSEHQIRLQQFSTPLPFAALVL
RAAAIRKGETVLEPSAGTGALAAFAARAGATLVLNEIDPFRQRLLRAVFGGEVTGHDGEH
IDDLLQTPVLPEVVVMNPPFASSVDRSRDKHIAAKHLIAAAKRLAPGGRLVAIMPPGFTP
ERDAAHWSRACGLLTPRLALTMPGQVYRKLGTSVETQLMVFDKVQEDGEMIRVPVRDLDE
ALAYVDAVAATRTEMRPVQRAAAIPHTRSSVPSSAPRKAAAAPVTPSKPRAKAVVPLSFT
SLQTPRDNMPISDIYARYRPQRIEIAGAQEHPTPLVESIAMASVAPPMPSNTRSDDLRLP
ARLIEEGHLSEAQLETIIMANDAHGRDLPGRFTIDDDQTKLTRADDDPHACPYRLGYFLG
DGTGCGKGRECAGLILVNWLAGRRKAIWVSKSATLIEDAIRDWTDLGGSPADIQPLSKWK
PDQSIPMGDGILFVTYATLRSAGKCGTTRLSQILDWMGEDFDGVLAFDEAHAMQNAAGSE
QGRGVKPSQQGLAGLRLQLAAPRARVFYISATGATSVHNLAYAARLGLWGQGPEYPFPSR
ESFVSAMEAGGVAAMEVVARDLKTLGLYTARALSFDGVEYDVLEHALTPAQIEIYDAYAG
AFRTIHHNLEAALTATGVNDASGETNASAARASAKSRFESTKQRFFNHLLMGMKAPSIIR
AIEDDLAAGKACVIQVVSTGESLLKRRLETMDPEDELVEGALTPRDYVLGYLEQAFPIHA
QKLVEIDGNMVAEPLRDETGALVVSREALALRDAAMMELMTLAPIPSALDQILWAFGDEA
VAEVTGRSIRPLKAEDGHLFIEKRAASSNSSETQAFMDGEKDILIFSDAGGTGRSYHAAQ
TAKNQKRRRHYLLEPGWRADAAIQGLGRTHRSAQVSAPFFRVCTSDVHGEKRFTSTIAKR
LDQLGALTKGQRETGSQGMFREEDNLESPIARAALRGYYADLAAGRAEAMSCESFTDWTA
LRLIDKDGVLLEELPPIQRFLNRVLALPIHMQNALFAEFMRRIADQSERARAAGTLDLGV
ETLRGEKIEQVSTEDLWTCPKSGAVTRIIGLEVTDPVHVLSADDALSRNPDKPPMVNRAS
GRAALISARPMQMYDEDIVTLMRKAVRPNGSSYLEETRFESSAWEEINRPEFAGLWDAEA
ASLPKTTTTKLYLLTGLLLPIWKDIPTTNERIYRVTPDGATAMIGRTLSEEGAAALRARF
LVSNPQTPQEMFTAALGTTAPVDLGRGLTLTRRRVAGEMRLELGGADRGMIEGLKAMGCF
TEIIAFQLRVFLPHGDGIDTGRILARIVGQGTTKAAEQAA
NT seq
4263 nt
NT seq
+upstream
nt +downstream
nt
atgtccaaacccagaacggccaacccggctctcgcaatctccgaagccgatctcgcctct
gccctcgtgcagatcggtgcggaggtcgaccaccaacccctgcgcagttcagcgctggcg
cgcatcatgcgcgagacgtttcatggcagcgatgccggtggcgcctgggactggcgcata
gcctatgacctgatgcaggccgcggctgttcaggtgctgctgcgtggggacggcgcggca
gatgacatcgccgctgcaaagctgcttgcctcgcggctgctgacggaaacccgccgctcc
gagcaccagatccggctgcagcagttttccacgccgctgccattcgcggcgctggtcttg
cgggccgcggcgatccgcaagggtgagaccgtgctggagccgtcggcgggcaccggtgcc
ctggccgctttcgctgcccgggccggtgccacgcttgtgctcaatgaaatcgaccccttt
cgccagcgcctcctgcgcgcggttttcggcggcgaggtcacaggccatgacggcgagcat
atcgatgatctgctgcagacgcccgttctgcccgaggtcgtggtgatgaacccgcccttc
gcttcctcggtcgaccgctcccgggacaagcacatcgctgccaaacatctcattgcggct
gcaaagcgcctggcaccaggtgggcggctggtggcgatcatgccgccaggattcacgccc
gaacgcgatgccgcgcattggtcccgcgcctgcggtctcctgacgccgcgactggcgttg
acgatgccggggcaggtctaccgcaagctcggcacctctgtcgaaacccagctgatggtc
ttcgacaaggtgcaggaggacggcgagatgatccgcgtccctgtgcgggatctggatgaa
gccttggcatatgtcgatgccgtggccgcaacccggaccgagatgcgcccagtccaacgg
gcggcagcgatccctcatactcggtcgagcgttccatcatctgccccgcgcaaggccgcc
gctgcgcctgtcaccccctccaaaccccgggccaaggccgttgtcccgctcagcttcaca
agccttcagaccccgcgcgacaacatgcccatctcggacatctatgcgcgctaccgtccg
cagcggattgagatcgcaggcgcgcaggaacatcccacgccgctagttgaaagcatcgcc
atggcctcggttgccccgcccatgccctcaaacacgcgcagtgatgacttgcgcctgccc
gcccggttgatcgaggagggacatctctccgaggcgcagctcgagaccatcatcatggcc
aatgatgcccatgggcgcgacttgccggggcgttttaccatcgatgacgaccagacaaag
ctgacgcgcgccgatgatgacccgcatgcgtgtccctatcgcctcgggtatttcctcggc
gacggcaccggttgcggcaaggggcgcgaatgcgcggggctcatccttgtaaactggctg
gccgggcgcaggaaggcgatttgggtctccaaatccgccacgcttatcgaggacgcgatc
cgcgactggactgatcttggcggctcgcccgccgacatccagccgctctccaaatggaaa
ccggaccagtccatcccgatgggcgacggcatcctttttgtgacctacgccactttgcgc
tccgcgggcaaatgcggcaccacgcgactgagccagatcctcgactggatgggtgaagac
ttcgacggcgtgctggcttttgatgaagcccatgcgatgcagaacgcggcggggtccgag
cagggcaggggggtcaaaccctcgcagcagggccttgctggcctccggctgcaactcgct
gccccgcgcgcccgcgtcttctacatctcggccacgggtgccaccagcgtgcacaacctc
gcctatgccgcgcgtctcggtctctggggacaagggcctgaataccccttcccaagccgc
gagagtttcgtctcggcgatggaagccggcggcgtggccgccatggaggtggtcgcgcgc
gatctcaagacgctcggcctctacacggcccgcgccctcagttttgatggcgtggaatac
gatgtgctggaacacgcgctcacccctgcccagatcgagatctacgacgcctatgcgggt
gcgtttcggacgatccaccacaatctcgaagccgcgttgactgcgaccggcgtcaacgat
gcctcgggcgagaccaatgcctcggccgcacgcgcctcggccaagtcccgcttcgagagc
acgaagcagcgcttcttcaaccatcttctgatgggcatgaaggctccaagcattatccgc
gccatcgaggacgatctggcggcgggcaaggcttgcgtcatccaggttgtctcgacaggt
gagagcctgctcaaacgccgacttgagacgatggacccggaggatgaactcgttgagggg
gccttgacgccgcgcgactatgttctgggctacctcgaacaggccttcccgatccatgcg
caaaagctggtcgagatcgacggcaatatggtggcggaacctttgcgggatgagaccggg
gcgctggtcgtctcgcgcgaggcgctcgctttgcgagatgcggccatgatggagttgatg
acgctggctccgatcccctcggcgctcgatcagatcctctgggcctttggcgacgaggcc
gtggcagaagtcacggggcggtccatccggcccctcaaggctgaggatggtcatctcttc
atcgagaagcgcgccgccagcagcaattcgtccgagacccaagcttttatggatggtgag
aaggatatcctgatcttctccgatgcgggcgggacgggccggtcctatcacgcggcgcaa
acggcgaagaaccagaaacggcggcggcactatcttctggagcccggctggcgcgcggat
gcggccatccaggggctgggccgcacgcatcgctctgcccaggtcagcgcgccgttcttc
cgtgtctgcacctccgatgtgcatggcgagaaacgcttcacgtcgacgattgccaaacgc
ctcgaccagctgggggccttgaccaagggtcagcgcgagaccggctcgcagggcatgttc
cgcgaggaggacaatctcgaaagcccgatcgcgcgggcggcattgcgtggctactatgcc
gatcttgccgccgggcgcgccgaggcgatgagctgcgagagcttcaccgactggacagcc
ctgcgactgatcgacaaggacggtgtgctgctcgaggagctgcctccgatccagcggttt
ctcaatcgggtgcttgcccttcccatccacatgcagaacgcgctctttgccgagttcatg
aggcggattgccgatcagtctgagcgcgcgcgggcggcgggcacgctcgatctcggcgtg
gaaaccctgcgcggcgaaaagatcgaacaggtctccacagaggatctctggacctgcccg
aaatccggcgccgtgacgcggatcatcggacttgaggtgacggacccggtccacgtgctg
tcggcggatgacgccctatcgcgcaaccccgacaagccgccgatggtcaatcgcgcctcc
ggtcgcgcggcgctcatctcggcgcggcccatgcagatgtatgacgaggacatcgttacg
ctgatgcgcaaggcggtgcggccaaacgggtcgagctatctagaggagacgcggttcgag
tcctcggcctgggaagagatcaacaggcccgagtttgcaggactttgggatgccgaggct
gcatccctgccaaaaaccaccacgaccaagctttacctgctgactgggctgctgctgccg
atctggaaggacattccgaccaccaatgagcgtatctaccgcgtcacgccggacggggcg
accgccatgatcgggcgcacgctgagcgaagaaggggcggccgcgctgcgcgcccgcttc
ctcgtctccaatccgcaaacgccgcaggagatgttcaccgccgccctcggcaccaccgcg
cctgtcgatctgggccggggtctgaccctgacccgtcgccgggtcgcaggcgagatgcgt
ctcgagctgggcggtgcggatcggggcatgattgaaggtctcaaggccatggggtgtttc
acggagatcatcgccttccagttgcgggtgttcctgccgcatggggacgggatcgacacg
ggccgcattctggcccggatcgttgggcagggaaccaccaaagcggcagaacaagctgcc
tga
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