Ralstonia pickettii 12D: Rpic12D_0189
Help
Entry
Rpic12D_0189 CDS
T00925
Name
(GenBank) Serine-type D-Ala-D-Ala carboxypeptidase
KO
K07258
serine-type D-Ala-D-Ala carboxypeptidase (penicillin-binding protein 5/6) [EC:
3.4.16.4
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00550
Peptidoglycan biosynthesis
rpf01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpic12D_0189
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
rpf01002
]
Rpic12D_0189
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpf01011
]
Rpic12D_0189
Enzymes [BR:
rpf01000
]
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
Rpic12D_0189
Peptidases and inhibitors [BR:
rpf01002
]
Serine peptidases
Family S11: D-Ala-D-Ala carboxypeptidase A family
Rpic12D_0189
Peptidoglycan biosynthesis and degradation proteins [BR:
rpf01011
]
Peptidoglycan biosynthesis and degradation
DD-Carboxypeptidase/DD-Endopeptidase (Low molecular weight PBP)
Rpic12D_0189
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_S11
PBP5_C
Beta-lactamase2
Beta-lactamase
DNA_methylase
Peptidase_S13
Motif
Other DBs
NCBI-ProteinID:
ACS61499
UniProt:
C6BB87
LinkDB
All DBs
Position
1:complement(198747..199949)
Genome browser
AA seq
400 aa
AA seq
DB search
MQNRFAHFTPIAFHSAAATAVAAAVLVTALPAMAQPVPAPQVAARSWMLTDVTSGQVLGG
ANMDERIEPASLTKLMTAYLVFEAVRDGKLKYDQMITPTETVRTVKTDESRMFLEAGKPA
SVREMTQGLIIQSGNDAALVLAEAVGGTETNFVMLMNREAERLGMKNTHFANAAGLPDPN
HYSTARDLSILTAALIKDFPQDYKFYSQKEFTYNNIKQSNRNRLLWLDPTVDGGKTGHTK
SAGYCLVTSANRPLPDVPGANRRLLSVIIGTKSDAIRTQESLKVLNYGYQFFDTVRLYQA
KEALQTPDVYKGQAKSVKLGVAEDKWITVPKGAGARLKPVLERKDPLIAPIAQGQQLGTV
KVMDGSTVVSEFPVVALEAVPEAGFIGRTIDAVKLWFKKK
NT seq
1203 nt
NT seq
+upstream
nt +downstream
nt
atgcagaaccgcttcgcccatttcacgcccatcgccttccattccgccgccgcaaccgcc
gtggccgccgccgtgctggtcaccgcgctgcccgccatggcgcagccggtgcccgccccg
caagtcgcggcccgctcgtggatgctgaccgacgtgaccagcggccaggtgctcggcggc
gccaacatggacgaacgcatcgagcccgcctcgctcaccaagctgatgacggcctacctc
gtcttcgaagccgtgcgcgacggcaagctcaaatacgaccagatgatcacgcccaccgag
accgtgcgcaccgtcaagaccgacgaatcgcgcatgttcctggaagccggcaaaccggcc
tcggtgcgggagatgacgcaaggcctgatcatccagtctggcaacgatgcagccctcgtg
ctggctgaggccgtaggcggcaccgagacgaacttcgtgatgctgatgaaccgcgaagcc
gagcgtctgggcatgaagaacacgcatttcgcgaacgccgcgggcctgcctgatccgaac
cactactccacggcacgtgatctttcgatcctgaccgcggcgctgatcaaggatttcccg
caggactacaagttctactcgcagaaggaattcacctataacaacatcaagcagtccaac
cgcaaccgcctgctgtggctcgacccgaccgtcgacggcggcaagacgggccacaccaag
tcggccggctactgcctcgtcacctctgccaaccgtccgctgccggacgtgccgggcgcg
aaccgtcgcttgctgtcggtcatcatcggcaccaagagcgacgcgatccgcacgcaggag
agcctgaaggtcctgaactacggctatcagttcttcgataccgtgcgcctgtaccaggcc
aaggaagccctgcagacgcccgacgtgtacaagggccaggccaagagcgtgaaactcggc
gtggcggaagacaagtggatcaccgtgcccaagggtgcaggcgcacgcctgaagccggtg
ctggagcgcaaggacccgctgatcgccccgatcgcccagggccagcaactgggcacggtc
aaggtgatggacggctcgaccgtcgtgtcggaattcccggtggtggcactggaagcggtg
ccggaagccggctttatcggccgcaccatcgacgcggtcaagctgtggtttaaaaagaag
taa
DBGET
integrated database retrieval system
