Ralstonia pickettii 12D: Rpic12D_0535
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Entry
Rpic12D_0535 CDS
T00925
Name
(GenBank) chaperonin GroEL
KO
K04077
chaperonin GroEL [EC:
5.6.1.7
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
Rpic12D_0535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
rpf03019
]
Rpic12D_0535
03110 Chaperones and folding catalysts [BR:
rpf03110
]
Rpic12D_0535
03029 Mitochondrial biogenesis [BR:
rpf03029
]
Rpic12D_0535
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpf04147
]
Rpic12D_0535
Enzymes [BR:
rpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.1 Enzymes altering polypeptide conformation or assembly
5.6.1.7 chaperonin ATPase
Rpic12D_0535
Messenger RNA biogenesis [BR:
rpf03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
Rpic12D_0535
Chaperones and folding catalysts [BR:
rpf03110
]
Heat shock proteins
HSP60 / Chaperonin
Rpic12D_0535
Mitochondrial biogenesis [BR:
rpf03029
]
Mitochondrial protein import machinery
Matrix
Other matrix factors
Rpic12D_0535
Exosome [BR:
rpf04147
]
Exosomal proteins
Exosomal proteins of haemopoietic cells (B-cell, T-cell, DC-cell, reticulocyte, and mast cell)
Rpic12D_0535
Exosomal proteins of other body fluids (saliva and urine)
Rpic12D_0535
Exosomal proteins of breast cancer cells
Rpic12D_0535
Exosomal proteins of colorectal cancer cells
Rpic12D_0535
Exosomal proteins of bladder cancer cells
Rpic12D_0535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Cpn60_TCP1
Motif
Other DBs
NCBI-ProteinID:
ACS61840
UniProt:
C6BDA5
LinkDB
All DBs
Position
1:566110..567753
Genome browser
AA seq
547 aa
AA seq
DB search
MAAKDVVFGDAARAKMVEGVNILANAVKVTLGPKGRNVVLERSFGGPTVTKDGVSVAKEI
ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQSIVREGMKYVAAGMNPMDLKRGI
DKAVTAAVEELKKISKPTTTSKEIAQVGAISANSDESIGQRIAEAMDKVGKEGVITVEDG
KSLADELDVVEGMQFDRGYLSPYFINNPEKQVVQLDNPFVLLFDKKISNIRDLLPVLEQV
AKAGRPLLIIAEDVEGEALATLVVNNIRGILKTAAVKAPGFGDRRKAMLEDIAILTGGQV
IAEEVGLTLEKATLNDLGQAKRVEIGKENTTIIDGAGDARNIEARVKQVRAQIEEATSDY
DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARALISGLKGANADQDAGIKIVLRAMEEPLRQIVTNAGDEASVVVSKVIEGKGNYGYNA
ATGEYGDLVEMGVLDPTKVTRTALQNAASVASLMLTTDCAVAELPKDDTAPAMPGGMGGM
GGMDGMM
NT seq
1644 nt
NT seq
+upstream
nt +downstream
nt
atggcagctaaagacgtagtgttcggcgacgccgcacgtgccaagatggtcgaaggcgtg
aacattctcgccaacgcagtgaaggtgaccctgggcccgaagggccgcaacgtggtgctg
gagcgcagcttcggtggcccgaccgtgaccaaggacggtgtgtcggtcgccaaggaaatc
gagctgaaggacaagctgcagaacatgggcgcgcaaatggtcaaggaagtcgcttccaag
accagcgataacgccggtgacggcaccaccaccgcaacggtgctggcccagtcgatcgtg
cgcgaaggcatgaagtacgttgccgccggcatgaacccgatggacctgaagcgcggtatc
gacaaggctgtgacggccgctgtcgaagagctgaagaagatcagcaagccgacgaccacc
agcaaggaaatcgctcaagttggcgccatctcggccaacagcgacgaatccatcggccag
cgcatcgctgaagccatggacaaggtcggcaaggaaggcgtgatcacggtggaagacggc
aagtcgctggccgacgagctggacgtcgtggaaggcatgcagtttgaccgcggctacctg
tcgccgtacttcatcaacaacccggaaaagcaagttgttcagctggacaacccgttcgtg
ctgctgttcgacaagaagatcagcaacatccgcgacctgctgccggtgctggagcaagtg
gccaaggctggccgtccgctgctgatcatcgctgaagacgttgaaggcgaagccctggca
acgctggtggtgaacaacatccgtggcatcctgaagaccgccgccgtgaaggctccgggc
ttcggcgaccgccgcaaggccatgctggaagacatcgccatcctgacgggcggccaggtc
atcgctgaagaagtcggcctgaccctggaaaaggcaaccctgaacgacctgggccaagcc
aagcgcgttgaaatcggcaaggaaaacaccacgatcattgatggcgcaggcgatgcccgc
aacatcgaagcccgcgtgaagcaagtgcgcgcccagatcgaagaagcgacctcggactac
gaccgtgaaaagctgcaagagcgcgtggccaagctggccggcggtgttgccgtgatcaag
gtcggcgctgccaccgaagtcgaaatgaaggaaaagaaggcccgcgtggaagatgctctg
cacgcaacgcgcgctgccgtggaagaaggcatcgtggctggtggcggtgttgcactgctg
cgtgcccgtgcgctgatctccggcctgaagggtgcgaacgctgaccaagacgccggtatc
aagatcgtgctgcgcgccatggaagagccgctgcgccagatcgtcaccaacgctggcgac
gaggcttcggttgtggtgtcgaaggtgatcgaaggcaagggcaactacggctacaacgcc
gccaccggcgagtacggtgacctggtcgaaatgggcgtgctggacccgaccaaggtgacc
cgcaccgcgttgcagaacgccgcttcggtcgcttcgctgatgctgacgacggattgcgcc
gtggcagaactgccgaaggacgatacagctccggcaatgccgggcggcatgggtggcatg
ggcggcatggacggcatgatgtaa
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