Ralstonia pickettii 12D: Rpic12D_0565
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Entry
Rpic12D_0565 CDS
T00925
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_0565
Enzymes [BR:
rpf01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
Rpic12D_0565
DNA repair and recombination proteins [BR:
rpf03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
Rpic12D_0565
Prokaryotic type
Rpic12D_0565
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
ACS61870
UniProt:
C6BDD5
LinkDB
All DBs
Position
1:complement(600715..602271)
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AA seq
518 aa
AA seq
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MPSTAPSRQPYNIGAHFQRGLVWFRRDLRHVDHAALHYALRHCREVYCVFVFDRDILDAL
LARGLKADRRVEFIRASIEELRGALREAGGDLIVVHDHPRHAIPEIARQLNVEAVFANHD
EEPSAQARDEAVRKALAQQPCAWFDFKDQVIFERDEILNGQGKPYGVFTPYKNAWLAALT
PLDLRAYPTEPYFGALARPPEALAQPTPALEAMGFARTNLSEIALPSGMSGGQTLLDEFE
ERMDDYHARRDFPAVRGPSYLSTHLRFGTVSIRTLAARAHAAMLRGSRGAATWLSELVWR
DFYFMILHHRPDLADGAAFHPEFDRIRWVDGDTGDARFEAWKAARTGYPLVDAAMLQIFQ
SGYMHNRLRMVAASFLIKDLGIDWRRGEQYFADVLNDFDFAANNGGWQWAASSGCDAQPW
FRIFNPVTQSEKFDPQGRFIRKYLPQLAKLPDKYIHAPWTAPANVLKEASVVLGETYPLP
IVDHAAARAATLDRYAVTKAHRTSGAEAAALTKAGADD
NT seq
1557 nt
NT seq
+upstream
nt +downstream
nt
atgccctccaccgccccaagccgccagccttacaacatcggagcgcacttccagcgtggt
ctggtgtggttccggcgcgatctgcggcacgttgaccacgcggcgctgcattatgccttg
cggcactgccgcgaggtctattgcgtgttcgtgttcgatcgcgacatcctcgacgcgctg
cttgcgcgcgggctcaaggccgaccgccgcgtcgagttcatccgtgcgtccatcgaagaa
ctccgcggcgcattgcgcgaggccggcggcgacctgatcgtcgtccatgaccacccacgc
cacgcgattccggagatcgcgcgccagctcaacgtcgaagcggttttcgccaaccacgac
gaagagccttccgcgcaggcccgcgacgaagcggtgcgcaaagcattggcgcagcagccg
tgcgcctggttcgacttcaaggatcaggtgatcttcgagcgcgacgagatcctgaatggg
caaggcaaaccgtacggcgtcttcacgccttacaagaacgcctggttggccgcgctgacg
ccgttagacttgcgcgcgtatccgacagagccctacttcggcgcgctggcgaggccgcct
gaggcacttgcgcagcctacgcctgcgctggaagcgatgggcttcgcccgcaccaatctg
tcggaaatcgccctgcccagcggcatgtcgggcgggcaaaccctgctcgacgagtttgaa
gagcgcatggacgactaccatgcgcgccgcgactttcccgccgtgcgcggacccagctat
ctgtccacgcacctgcgctttggcaccgtatcgatccgcacgctcgctgcgcgcgcacat
gccgccatgctgcgcggcagccggggcgcggcgacgtggttgtcggaactggtctggcgg
gatttctatttcatgatcctgcatcaccgcccggatctggcagatggcgccgcgttccat
ccggaattcgaccgcatccgctgggtggacggcgacactggcgacgcgcgctttgaagcg
tggaaggccgcgcgcaccggttatccgctggtggatgcggccatgctgcagatcttccag
agcggctacatgcacaaccgcctgcgcatggtggcggccagttttctcatcaaggatctt
ggtatcgactggcggcgcggcgagcagtattttgccgacgtgctgaacgatttcgacttc
gccgccaacaacggcggctggcagtgggccgcgtccagtggatgcgatgcgcaaccgtgg
ttccgcatcttcaaccccgtcacgcagtcggagaaattcgacccgcaaggccgtttcatc
cgcaagtacctgccgcaactggcgaagctgcccgacaagtacatccacgcaccgtggacg
gcaccagccaatgtgttgaaggaagcaagcgtggtactgggcgagacgtatccgctgccc
atcgtcgaccacgcggccgcccgcgcagcgacgctcgaccgctatgccgtcaccaaggca
catcgcacatcgggcgctgaggctgcggcacttaccaaagccggcgccgacgattga
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