Ralstonia pickettii 12D: Rpic12D_0842
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Entry
Rpic12D_0842 CDS
T00925
Name
(GenBank) DNA gyrase, A subunit
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpf03032
]
Rpic12D_0842
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_0842
Enzymes [BR:
rpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
Rpic12D_0842
DNA replication proteins [BR:
rpf03032
]
Prokaryotic type
DNA Topoisomerases
Rpic12D_0842
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rpic12D_0842
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ACS62143
UniProt:
C6BEV6
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All DBs
Position
1:881128..883797
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AA seq
889 aa
AA seq
DB search
MDQFAKETLPVSLEEEMRSSYLAYAMSVIVGRALPDVRDGLKPVHRRALYSMHELNNDWN
RPYKKSARIVGDVIGKYHPHGDTAVYDTIVRMAQNFSLRYMLVDGQGNFGSVDGDNAAAM
RYTEIRLSKIAHELLADLDKETVNFEPNYDGSETEPSVLPARIPNLLINGSSGIAVGMAT
NIPPHNLNEVVDGCLHLLRNPEATVDELIELIPAPDFPTAGIIYGISGVREGYRTGRGRV
VMRAKTHFEDIDRGQRQAIIVDELPYQVNKRTLLERIAELVTEKRIEGISDIRDESDKSG
MRVVIELKRGEVPEVVLNNLYKNTQLQDTFGMNMVALVDGQPRLLNLRQMLECFLLHRRE
VVTRRTVFDLRKARERGHILEGLAVALANIDEFIAIIKAAPTPPVAKAELMNRSWDSGLV
RDMLVRAESETSGGGAAYRPEGLLPVFGMQGDGLYRLSDTQAQEILQMRLQRLTGLEQDK
IVQEYREVMAQIADLLDILAKPERITAIIVEELTAIRAEFGDERRSQIEHNATELDTEDL
ITPQDLVVTLSHSGYMKSQPISEYRAQKRGGRGKQAAATKEDDWIDTLFVANTHDYILCF
SNRGRLYWLKVWEVPQGSRNSRGRPIVNMFPLSPGEKINVILPVKQFDEQHFVFMATSKG
TVKKTALTEFSNPRKAGIIAVDLDEGDFLIGADITDGQHDVMLFSDAGKAVRFDENDVRP
MGRQARGVRGMNLEENQQVIAMLVAPAETAGEGAQSGAGSVLTATENGYGKRTPISEYTR
HGRGTKGMIAIQTSERNGKVVAAALVAPEDEIMLITTGGVLIRTRVDEIREMGRATQGVT
LISVGEGNKLSGLQRVMESDAEGADAVEGADAADAAPGADAQSDDSSET
NT seq
2670 nt
NT seq
+upstream
nt +downstream
nt
atggatcaattcgccaaagagacactcccggtatcgctcgaagaagaaatgcgcagttcg
tacctcgcttacgccatgagcgtgatcgtgggccgcgcgcttcccgatgtgcgggatggt
ctcaagccggtgcatcgccgtgcgctgtactcaatgcacgagctgaacaacgactggaat
cgcccctataagaagtccgcccgtatcgtcggggatgtgatcggtaagtatcacccccac
ggcgacactgctgtatacgacaccatcgtgcggatggcgcagaacttctcgctgcgctac
atgctggtcgacggccaaggcaacttcggctcggtcgacggcgacaacgccgcggcgatg
cgttacaccgaaatccgcctgtcgaagattgcccacgagctgctggcagacctcgacaag
gaaaccgtcaattttgagccgaactacgacggctccgaaactgaaccgtccgttctgccg
gcgcgcattcccaacttgctgatcaacggttcgtccgggattgcggtggggatggcgaca
aacattccgccgcacaacctcaatgaggtggttgatggctgcttgcacttgctgcgcaac
ccggaagcgacggtcgacgagctgatcgaactgattccggcgccggatttcccgacggcg
ggcattatctatggcatttcgggtgtgcgtgaaggctatcggaccggccgcggccgtgtg
gtgatgcgcgccaagacgcacttcgaagatatcgaccgcggccagcgccaggcgatcatc
gtcgacgaactgccgtatcaagttaacaagcgcacgctgctcgagcgtattgctgagctg
gtcaccgaaaagcgtatcgaaggcatttccgacattcgcgacgaatcggacaagtccggc
atgcgcgtggtgatcgaactgaagcgcggcgaggtgccggaggttgtgctcaacaacctc
tataagaatacgcagctgcaagacacgttcggcatgaacatggtggcgctggtcgacggc
cagccgcgcctgctgaacctgcgccagatgctggagtgcttcctgctgcatcgccgcgag
gtggtgacgcgtcgcaccgtgttcgacctgcgcaaggcgcgcgaacgtggtcacatcctg
gaaggtctggctgttgcgcttgccaacatcgacgaattcatcgccatcatcaaggctgcg
ccgacaccgccggttgccaaggctgagctgatgaaccgcagttgggattcgggcctcgtc
cgcgacatgctcgttcgcgccgagagcgaaacctctggcggtggcgccgcgtatcggccg
gaaggtctgctcccggtgtttggtatgcagggcgacggcttgtacaggctgtcggatacg
caagcgcaggaaattctgcagatgcgcctgcaacgcctcaccgggctggagcaagacaaa
atcgtccaggaataccgcgaggtgatggcgcagatcgccgatctgttggacatccttgcg
aagccggagcgcattaccgccatcatcgtcgaggaactgaccgcgatccgcgcggaattc
ggcgatgagcgtcgctcgcagatcgagcacaatgcgaccgagttggatacagaagacctc
attacgccacaagatctggtggtgacgctgtcccacagcggctacatgaagagccagccg
atttccgaataccgggcgcaaaagcgtggcggccgcggcaagcaagctgcggcgacgaag
gaagacgattggatcgacacgctattcgtcgccaacacacacgattacatcctctgcttc
tcgaaccgcggccgtctgtattggctgaaggtgtgggaggtgccacagggcagccgtaac
tcgcgcggtcgcccgatcgtcaatatgttcccgctgtcgccgggcgagaagatcaacgtg
atcctgccggtgaagcagttcgacgagcagcacttcgtctttatggccacctccaagggg
acggtcaagaagacggcgctcaccgaattctcgaatccgcgcaaggccggcattatcgcg
gtcgatttggatgagggcgatttcctgatcggcgcggacattaccgatggtcagcatgat
gtgatgctgttctccgacgccggaaaggcggtgcgcttcgatgagaacgacgtgcgcccg
atgggtcgtcaggcgcgtggtgtgcgcggtatgaatctcgaagagaaccagcaggtgatt
gccatgttggtcgcgccggcagaaaccgcgggtgaaggggctcaatccggtgcgggtagc
gtgctgaccgccaccgagaacggctacggtaagcgcacaccgatctcggagtacacccgg
cacggccgcggcacgaagggcatgatcgccatccagacctccgagcgtaacggcaaggtc
gtggccgccgcgctggtggcgcctgaagacgagatcatgctaatcacgacgggcggggtg
ctgatccgcacgcgtgtggacgagatccgtgaaatgggccgcgctacgcagggcgtcacg
ctcatctcggtgggtgagggcaacaagctgtccggactgcaacgtgtgatggagtccgat
gctgaaggcgcggatgctgttgaaggcgccgatgcggcggatgccgccccgggtgccgat
gcacagtcggatgacagcagcgagacataa
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