Ralstonia pickettii 12D: Rpic12D_0995
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Entry
Rpic12D_0995 CDS
T00925
Name
(GenBank) DNA repair protein RecO
KO
K03584
DNA repair protein RecO (recombination protein O)
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
Rpic12D_0995
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_0995
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
Rpic12D_0995
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
RecET pathway
Rpic12D_0995
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RecO_N
RecO_C
Motif
Other DBs
NCBI-ProteinID:
ACS62295
UniProt:
C6BFN2
LinkDB
All DBs
Position
1:1045664..1046485
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AA seq
273 aa
AA seq
DB search
MAGRSDPIPDEAAEWLAEEGVAGAAPRKSFPAGRSETRVAAQPAFVLHSYPYRETSLIID
VFTPDYGRMALVAKGAKRPHSALRAVLQTFQPLSLSWSGRGDVRTLTRAEWVGGMLPLGG
EGLLSGFYLNELLVKFVAREDGHPVLFAHYVETLNKLAHGEPAAFTLRAFERVLLRETGF
AAQLDRCIDGEPVQADAEYVYHPERGIRRTLPSDPSSWPVLRGQTLIDMERDDYGSRPTT
AQQSRSLMRFLLHYHLHGTPLSTRQILIDLQKL
NT seq
822 nt
NT seq
+upstream
nt +downstream
nt
atggcgggacgatccgatccgattccggacgaagccgcggaatggctggccgaagaaggc
gttgccggcgccgcgccgcgtaagagctttcctgcggggcgctccgaaacacgcgttgct
gcgcagccggctttcgtgctgcacagttacccgtatcgggaaaccagcctcatcatcgat
gtcttcacgccggattacgggcgcatggcgctggtcgccaagggagccaagcggccgcat
tcggcgctgcgtgcggtgctgcagaccttccagccgctgtcgctgtcctggagcggccgc
ggcgatgtgcgcacgctgacccgtgccgagtgggtcggcggcatgctgccgctgggcggg
gagggactgctttccgggttctatctgaacgaactgctcgtcaagtttgtcgcacgcgaa
gacggccacccggtgctgttcgcgcattacgttgaaacgctcaataagctcgcccatggc
gaacctgcggcctttacgctgcgcgcgttcgaacgtgtgctcctccgtgagaccggcttt
gctgcacagcttgatcgctgtatcgacggcgaacccgtgcaggccgatgccgaatacgtc
tatcaccctgagcgaggcatccggcgcacgctgccgagcgatccatcgtcctggcccgtc
ttgcgcggccagacgctgattgacatggagcgggacgattacggttcacgcccgacgacc
gcgcagcaaagccgcagcctgatgcgtttcctgctgcattatcatttgcatggcacgccg
ctttcgacgcgccagatcctgatcgacttgcagaaactatga
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