Ralstonia pickettii 12D: Rpic12D_1042
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Entry
Rpic12D_1042 CDS
T00925
Name
(GenBank) Integrase catalytic region
Organism
rpf
Ralstonia pickettii 12D
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mu-transpos_C_2
HTH_23
HTH_24
HTH_29
HTH_11
HTH_IclR
HTH_7
Sigma70_r4_2
Phage_NinH
Sigma70_r4
HTH_38
TnsD
HTH_17
HTH_AsnC-type
HTH_28
HTH_3
HTH_Tnp_ISL3
HTH_10
HTH_31
GntR
HTH_22
DUF1804
HTH_Tnp_Tc3_1
NUMOD1
HTH_20
KfrA_N
MerR
HTH_8
HTH_30
HTH_DeoR
HTH_36
GerE
Motif
Other DBs
NCBI-ProteinID:
ACS62335
UniProt:
C6BG36
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All DBs
Position
1:complement(1093338..1094864)
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AA seq
508 aa
AA seq
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MIDVAILSIIRRWHLRDQIPLREIARRLGISRNTVRRYLRADTAAPAYPARQSPSKLGGH
AAKLSAWLKTEANKPRKQRRTLKQIHTDLCALGFTGSYDRVAAFARRWRQEQQEQARTSG
RGTFIPLRFAEGEAFQFDWSEDWAIIAGERTKLQVAQFKLSHSRAFFLRAYLLQTHEMLF
DAHHHAFVAWGGIPRRGIYDNMKTAVDRVRQGKLRDVNLRFSTMVSHYLFDAEFCNPASG
WEKGQIEKNVQDSRHRIWQRIPAFGSLAALNDWLADQCVRLWQQTRHPELDMTLWEAWSL
ERPHLMPVGQPFDGFVEHTKRVSPTCLVTFERNRYSVPASFANRPISLRVYADRLVFVAE
GQVIAEHVRHIDRSHLPGRTIYDWHHYLAVLQRKPGALRNGAPFAELPEGFRRLQSTLLK
RPGGDREMVEILALVLLHDEQAVLTAVELALEAGAPSKQTILNILSRLLEGEPVAPITSP
QALALHVEPQANVGRYDSLRDREVHHAA
NT seq
1527 nt
NT seq
+upstream
nt +downstream
nt
gtgatcgacgtggccatactgagcatcattcgacgctggcatcttcgcgaccagatcccg
ctgcgcgagatcgccagacgcctgggcatctccaggaacaccgtcagacgctatttgcgc
gctgacaccgccgcaccggcctatcctgcacggcagagcccgagcaagcttggcggccat
gccgccaagctctccgcttggctcaagaccgaggccaacaagccacgcaagcaacggcgc
acactcaagcagatccacactgatctgtgtgccttgggcttcaccggctcctacgatcgc
gttgccgcattcgctcgccgctggcgccaggagcaacaggagcaagcccgcacgtcgggg
cgcggcacctttatcccgctgcgcttcgcagaaggtgaggccttccagttcgactggagc
gaggactgggcgatcatcgccggcgagcgtaccaagctgcaggtggcccagttcaagctc
agccacagccgcgccttcttcctgcgcgcgtatctgctgcagacccacgagatgctgttc
gatgcccatcaccacgcctttgtggcctggggcggcatcccgcgtcgcggcatctacgac
aacatgaagaccgccgtggatcgcgtgcgccaaggcaagctgcgcgacgtcaacctgcgc
ttcagcaccatggtcagccactacctgttcgacgccgagttctgcaacccggcctccggc
tgggagaaggggcagatagagaagaacgtgcaggacagccgtcaccgcatctggcagcgc
atccctgcattcggctctctcgccgcgctcaatgactggctggccgaccagtgcgtacgt
ctgtggcagcagacccgccatccggaactggacatgaccctctgggaggcctggtcgctg
gagcggccacacctgatgccggtggggcagccgttcgatggctttgtcgagcacaccaag
cgcgtttcaccgacctgcctggtgaccttcgagcgcaaccgctacagcgtgccggcgtcg
tttgccaaccggcccatcagtctgcgcgtctatgccgaccggctcgtgttcgtggccgaa
ggccaggtgattgccgagcacgtgcggcacatcgaccgtagccatcttccgggacgcaca
atctatgactggcaccactacctcgcggtgctgcagcgcaagcccggtgcgctgcgtaac
ggcgcaccgttcgccgaactgcccgagggcttccggcgtctgcagtccacactgctcaag
cgacccggcggcgatcgcgagatggtcgagatcctggcgctggtgctgctgcacgacgaa
caggccgtgctgacggcggtggaactcgcactggaggctggtgcaccgtccaaacaaacc
atcctgaacatcctcagccgcctcctggaaggcgagcccgtggcaccgatcacctcaccg
caagcactggcgctgcacgtcgaaccgcaggccaacgtcggccgctacgacagcctgcga
gatcgggaggtgcatcatgcagcatga
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