Ralstonia pickettii 12D: Rpic12D_1103
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Entry
Rpic12D_1103 CDS
T00925
Name
(GenBank) HhH-GPD family protein
KO
K01247
DNA-3-methyladenine glycosylase II [EC:
3.2.2.21
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
Rpic12D_1103
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_1103
Enzymes [BR:
rpf01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.21 DNA-3-methyladenine glycosylase II
Rpic12D_1103
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
Rpic12D_1103
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HhH-GPD
HC2
Motif
Other DBs
NCBI-ProteinID:
ACS62395
UniProt:
C6BG96
LinkDB
All DBs
Position
1:1158747..1159619
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AA seq
290 aa
AA seq
DB search
MNAVAKKANVVRSTVAKKAPAVKAPAAKKGVAKKVDGVASKTVAAKGVPVKVAKAPAKRV
PASKVPLPETLPTSEALPVPAEVVLSGPPEYWQEACADLMKRDRILRKIIPTYGPAHLAS
RGDPFVTLARSIVGQQISVKAAQSVWERVVAVCPKLVPAQFLRAGQERLAGCGLSKRKAE
YILDLADHFRNGTVHVAKWAEMEDEDVIAELTQIRGIGRWTAEMFLMFNLMRPNVLPLDD
IGLINAISQNYFSGEPVTRSEAREVAANWEPWRTVATWYMWRSLDTATTY
NT seq
873 nt
NT seq
+upstream
nt +downstream
nt
atgaacgcggtggccaagaaagccaacgtagtgcgcagcaccgtcgccaagaaagcgccg
gcggtgaaggccccggctgccaagaaaggggtggcgaagaaagtagacggcgtagcgagc
aagacggttgccgccaagggcgtgccggtaaaggttgccaaggctccggctaaacgcgtg
cctgcgagcaaggtgccgctgccggaaacgcttcccaccagcgaggcgctgcccgtgccg
gcggaagtggtgctctcgggcccgccggagtactggcaagaggcttgcgcagacttgatg
aagcgcgaccgcatcctgcgcaagatcatcccgacctacgggccggctcacttggcttcg
cgtggcgacccgttcgtcaccctcgcacgctcgattgtgggtcagcagatttcggtcaag
gctgcgcaatcggtgtgggagcgcgtcgtggctgtgtgccccaagctggtgcccgcccag
ttcctgcgcgccggtcaagagaggctggcgggttgcggtttgtccaagcgcaaggccgag
tacatccttgaccttgccgatcacttccgcaacggcaccgtgcatgtcgctaagtgggcg
gaaatggaagatgaggatgtgattgccgagctgacgcagatccgcggcatcggccgatgg
acggcagaaatgttcctcatgttcaatctgatgcgcccgaatgtgctgccgctggacgac
atcgggctcatcaacgcgatttcacaaaattatttcagtggcgaacccgtcactcgcagc
gaagcgcgcgaagtggccgccaactgggaaccgtggcgcaccgtggccacttggtatatg
tggcgcagcctagacacggcgaccacctattga
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