KEGG   Ralstonia pickettii 12D: Rpic12D_1156
Entry
Rpic12D_1156      CDS       T00925                                 
Name
(GenBank) RNA chaperone Hfq
  KO
K03666  host factor-I protein
Organism
rpf  Ralstonia pickettii 12D
Pathway
rpf02024  Quorum sensing
rpf03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:rpf00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    Rpic12D_1156
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    Rpic12D_1156
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:rpf03019]
    Rpic12D_1156
   03036 Chromosome and associated proteins [BR:rpf03036]
    Rpic12D_1156
Messenger RNA biogenesis [BR:rpf03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     Rpic12D_1156
Chromosome and associated proteins [BR:rpf03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    Rpic12D_1156
SSDB
Motif
Pfam: Hfq LSM Hfq_1 SRP14
Other DBs
NCBI-ProteinID: ACS62448
UniProt: C6BGR8
LinkDB
Position
1:1222742..1222981
AA seq 79 aa
MSNKGQLLQDPFLNALRKEHVPVSIYLVNGIKLQGNIESFDQYVVLLRNTVTQMVYKHAI
STVVPARAVNFRVDEAPDA
NT seq 240 nt   +upstreamnt  +downstreamnt
atgagcaacaaagggcaattgctacaagacccgtttctgaatgcgctgcgcaaggagcat
gtgccggtgtcgatctacctcgtcaacggtatcaagctgcaaggcaacatcgagtcgttc
gaccagtacgtcgtgctgctgcgtaacaccgtgacgcagatggtgtacaagcacgcaatc
tccaccgtggtgccggcacgtgccgtgaatttccgcgtggacgaagcgcctgacgcctga

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