Ralstonia pickettii 12D: Rpic12D_1207
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Entry
Rpic12D_1207 CDS
T00925
Name
(GenBank) pseudouridine synthase
KO
K06178
23S rRNA pseudouridine2605 synthase [EC:
5.4.99.22
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
rpf03009
]
Rpic12D_1207
Enzymes [BR:
rpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.22 23S rRNA pseudouridine2605 synthase
Rpic12D_1207
Ribosome biogenesis [BR:
rpf03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
Rpic12D_1207
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
Motif
Other DBs
NCBI-ProteinID:
ACS62499
UniProt:
C6BGW9
LinkDB
All DBs
Position
1:1279470..1281254
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AA seq
594 aa
AA seq
DB search
MPADADAQPPRQDGGDGTEATPRRKGLRRGLRNLVASRRQQQDGRPEGEAADAGGADAGQ
PAQPRKTRAPRARKPKEAAGEPAVVAAEGAAPAEQAPAENQGERRGPRGRFGKNRRRPGE
GQPLERAERNDRVEGAGGKNTGGRGKSQNRNGKPQGKAGGANQNRGGKGLKGGKGSEDVF
QYVISGAYDSEADTGGASQPPKARELTSEDDAPKLHKILADAGLGSRRDMEDLILQGRVS
VNGLPAHIGQRILATDQVRVNGKLIQRKLPNKPPRVLLYHKPSGEIVSQSDPEGRPTVFD
ALPRMKTGKWVAVGRLDFNTEGLLIFTTSGDIANRFMHPRYGVEREYAVRTLGELAETDR
QKLLHGIPLQDGEANFLRCVDGGGEGVNHWYHVALTEGRNREVRRMFEAVNLTVSRLIRT
RYGSFVLPRGLKRGRWQEVSAEDVRTLMGTLGMKVPTASSGGGQDRQGNRRRGPAPVLMG
PMSSGFAGEANFQSRGMGIENGNRAQPAQRRPSSPRQPDPMQTSMGYINVGGPTTLTART
RMGDRANGRGGAGTGGGMRDGNRIPGNKRPGKSAGGMPNGNKAPRGGGKRGGKR
NT seq
1785 nt
NT seq
+upstream
nt +downstream
nt
atgccggccgacgccgacgctcagccgccgcgacaagacggcggtgatgggactgaggcc
acccctcgccgcaagggattgcgccgaggcttgcgcaacctcgtggcttcgcgccgccag
cagcaggatggtcgccctgagggcgaagccgccgatgcgggtggtgcagacgccggccag
cctgcgcaaccgcgcaagacccgcgcgccacgggcgcgcaagccgaaagaggcggctggt
gagccggcggtagttgctgcagaaggtgctgcgccggccgaacaggcgccagcagaaaac
cagggcgagcgacgtggcccgcgcggccgtttcggcaagaaccgccgccgcccgggcgaa
ggtcagccgctggagcgcgccgagcgcaacgaccgtgtggaaggcgctggcggcaagaac
accgggggtcgtggcaagtcgcagaaccgcaacggcaaaccgcaaggcaaggcaggcggc
gcgaaccagaatcgcgggggcaaggggctgaagggaggcaagggctctgaagacgtcttc
caatacgtgatttccggggcgtacgactcagaggctgacaccggcggtgcatcgcagcct
cccaaggcgcgcgaactgacctccgaagacgacgctcccaaactgcacaaaatcctggct
gatgccgggcttggctctcgccgcgacatggaagacctgatcctgcaagggcgcgtctcc
gtgaatggcctgccggctcatatcggtcaacgcattctcgcgaccgaccaggtgcgcgtg
aacggcaagctgatccagcgcaagttgccgaacaagccgccgcgcgtgctgctgtatcac
aagccgtcgggtgaaatcgtcagccagtccgatccggaaggtcgtccgacggtgttcgac
gcgttgccgcgcatgaagaccggcaagtgggtcgccgtcggccgcctcgacttcaatacc
gagggcctgctgattttcacgacctccggcgatatcgccaaccggtttatgcacccgcgc
tatggtgttgaacgtgaatatgcggtgcgtacgctgggcgaattggctgagaccgaccgc
cagaagctgctgcacggtatcccgctccaggacggcgaggccaacttcctgcgctgcgtc
gacggcggcggcgagggtgtcaaccactggtaccacgtggccctgaccgaaggccggaac
cgtgaagtccgacgtatgttcgaggcggtcaatctgaccgtgtcgcgcctgatccgtacg
cgctatggcagcttcgtgctgccgcgtggcctcaagcgcggccgctggcaggaggtgtcg
gcagaggacgtgcgtacgctgatgggcacgctgggcatgaaggtgccgacggcgagttct
ggcggcggccaagatcgccagggcaaccgtcgccgtgggcccgcgccggtactaatgggc
ccgatgtcgtccggttttgctggggaagcgaacttccagtcacgcggtatgggcatcgag
aacgggaatcgcgcgcaacccgcgcagcgccgtccgtccagcccgcgtcagccggatccg
atgcagacgtccatgggctacatcaatgtgggaggcccaaccacgctcacagcgcggact
cgtatgggcgaccgtgcgaacggccgtggcggtgcggggacgggtggtggcatgcgtgat
ggcaatcgcatacccggcaacaagcgccccggaaagagcgctggcggcatgccgaacggc
aacaaggcgccacgcggtggtggcaaacgcggcggtaagcgttaa
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