Ralstonia pickettii 12D: Rpic12D_1212
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Entry
Rpic12D_1212 CDS
T00925
Name
(GenBank) tRNA pseudouridine synthase B
KO
K03177
tRNA pseudouridine55 synthase [EC:
5.4.99.25
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpf03016
]
Rpic12D_1212
Enzymes [BR:
rpf01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.25 tRNA pseudouridine55 synthase
Rpic12D_1212
Transfer RNA biogenesis [BR:
rpf03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
Rpic12D_1212
Prokaryotic type
Rpic12D_1212
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TruB_N
TruB_C_2
TruB-C_2
TruB_C
Motif
Other DBs
NCBI-ProteinID:
ACS62504
UniProt:
C6BGX4
LinkDB
All DBs
Position
1:1286879..1287835
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AA seq
318 aa
AA seq
DB search
MAEHQVPRPQKPPRRDVHGVLLLDKPIGWSSNDALIRAKRLLWAKKAGHTGTLDPLATGL
LPLCFGEATKFSQDLLDADKTYETVVRLGIRTSTADAEGEVLSERPVSVTPERLQAAIAR
FVGEIDQVPPMHSALKKDGKPLYEYARAGQTVERAARRVTIYGIDLLATDLQSAEPTITL
RVSCSKGTYIRTLGEDIGEALGCGGHLVALRRTQVGNLTLDGAVTLEALDAAAEDARGAL
LAPVDALLQTLPRVELDAQESRRFLHGQRLPLQLALPNADQVRVYGVRDAIAADATASLL
GVAAWQGGVLRPERLVHL
NT seq
957 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcaccaagtgcccaggccccaaaagccgccgcggcgtgatgtgcatggcgtg
ctgctcctagacaagccgatcggctggtcgagcaacgatgcgctgatccgcgccaaacgc
ctgctgtgggccaagaaggcggggcacaccggcacgctcgatccgcttgctacgggcctg
ttgcccctgtgttttggcgaggcgaccaagttttcgcaggatctgctcgatgcggacaag
acgtacgaaaccgtcgtgcgcctcgggatcaggacgagtaccgcagacgcggaaggcgag
gtgctgagcgagcgcccggtatcggtcacgcccgagcgactgcaggcagccatcgcgcgc
ttcgtcggcgagatcgaccaggtgccgccgatgcactcggcgctgaagaaggacggcaag
ccgctgtacgagtacgcccgtgcggggcaaacggtggaacgtgctgcgcgtcgggtaacg
atctacgggattgatctgctggcaaccgacctgcaatcggccgaaccgacgatcacgtta
cgcgtgtcatgcagcaaaggcacctacatccgtacgttgggtgaagacattggggaggcg
ctgggctgcggcgggcatctggttgcgctgcgtcgcacccaggtgggcaacctcacgctg
gacggcgccgtgacgctcgaagcgttggacgctgctgctgaagatgcacgtggtgcattg
ctggcgccggtcgatgcgctgttgcagacattgccgcgcgtggagctggatgcgcaagag
agccgtcgcttcctgcatggccagcgcttgccgttgcaattggcgttgccgaatgctgac
caggtgcgcgtctacggcgtgcgtgacgcgatcgcggcggatgccactgcgtcgctgctc
ggagtggctgcctggcaaggcggtgtgctccggccggagcggctcgtgcatctttga
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