Ralstonia pickettii 12D: Rpic12D_1384
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Entry
Rpic12D_1384 CDS
T00925
Name
(GenBank) 2'-5' RNA ligase
KO
K01975
RNA 2',3'-cyclic 3'-phosphodiesterase [EC:
3.1.4.58
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpf03016
]
Rpic12D_1384
Enzymes [BR:
rpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.4 Phosphoric-diester hydrolases
3.1.4.58 RNA 2',3'-cyclic 3'-phosphodiesterase
Rpic12D_1384
Transfer RNA biogenesis [BR:
rpf03016
]
Prokaryotic type
tRNA spricing factors
Other tRNA splicing factors
Rpic12D_1384
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2_5_RNA_ligase2
LigT_PEase
Acb1
Motif
Other DBs
NCBI-ProteinID:
ACS62672
UniProt:
C6BHR5
LinkDB
All DBs
Position
1:1463772..1464440
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AA seq
222 aa
AA seq
DB search
MRATRLSAGRHAGVDNGWIASPAFDDPAVTQLTLPGFEATPQLPAHRLFLAIKPDMDTAE
RIARLIQQLRPVVGFKGKALRTERLHVTLHHLGDFVHLPPDDVVARVRTAAAGLALPAFD
ATFNQVVSFHGRRDHRPFVLLGDEGVGGLMAFQAALGEALQHAAVPVQRGPFKPHITLLY
DRGGFAAKAVEPITWTVREFAFIHSWLGKTRYDELGRWALKG
NT seq
669 nt
NT seq
+upstream
nt +downstream
nt
atgcgagcaacacgactttcagcgggacgtcatgcgggcgtcgataatgggtggatcgcc
agcccggcgtttgacgaccctgccgtgacccagctcacccttcccggattcgaagccacc
ccgcaattgcccgcgcatcgcctgtttctggcgatcaagcctgacatggataccgccgag
cgcatcgcgcggctgatccagcaattgcggcccgtcgtgggcttcaagggcaaggcgctg
cgtacggagcgcctgcatgtcacgctgcatcaccttggcgatttcgttcatctgccgcct
gacgacgtcgtggcgcgtgtgcgtacagcagcggccggcctcgcgttgccggcattcgac
gccacgttcaaccaggtggtgagctttcatggccggcgcgatcatcggccgttcgtgttg
ctgggcgatgagggcgtgggcggcctgatggcgtttcaggcggcactgggcgaggcgctc
cagcatgccgccgtgccggtgcagcgcgggccgttcaagccgcacatcacgctgttgtat
gaccgcggcggctttgcggcgaaggcagtcgagcccatcacttggaccgtacgcgagttc
gctttcatccacagctggctcggcaagacgcgctacgacgaactcggccgctgggcgctc
aaaggctga
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