Ralstonia pickettii 12D: Rpic12D_2042
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Entry
Rpic12D_2042 CDS
T00925
Name
(GenBank) DNA polymerase I
KO
K02335
DNA polymerase I [EC:
2.7.7.7
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03030
DNA replication
rpf03410
Base excision repair
rpf03420
Nucleotide excision repair
rpf03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
Rpic12D_2042
03410 Base excision repair
Rpic12D_2042
03420 Nucleotide excision repair
Rpic12D_2042
03440 Homologous recombination
Rpic12D_2042
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpf03032
]
Rpic12D_2042
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_2042
Enzymes [BR:
rpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
Rpic12D_2042
DNA replication proteins [BR:
rpf03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
Other elongation factors
Rpic12D_2042
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA polymerase I
Rpic12D_2042
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rpic12D_2042
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A
5_3_exonuc_N
DNA_pol_A_exo1
5_3_exonuc
DNA_polI_exo1
HHH_2
Motif
Other DBs
NCBI-ProteinID:
ACS63321
UniProt:
C6BKK2
LinkDB
All DBs
Position
1:complement(2175176..2177989)
Genome browser
AA seq
937 aa
AA seq
DB search
MSESQETLLLVDGSSYLYRAYHALPDLRNGEGFPTGAIYGIVNMLRKLRNDYPAKYSACI
FDAKGKTFRDDLYPAYKEHRAPMPDDLRAQIEPIHEAVRALGWPILVIEGVEADDVIGTL
AERAAREGVRTIVSTGDKDLAQLVNDHVTLVNTMTNETLDPAGVQAKFGVPPERIVDYLS
LIGDTVDNVPGVPKVGPKTAVKWLTEFGSLDNVIARAGEIKGVVGENLRNTLEWLPKGRE
LLTVKLDCDLSKEVPTFDALIDGGEDKSKLVDFFSRYGFKTWLREASGEALPDTRSVGAA
RKAATPVKNYAGEAAQLQAQANLFDVEAPPDEIKYETVTTEAQLESWMQRLDEVDLVCID
TETTSIDPMLAQLVGISLSVKPGEACYIPVAHRGPDVAGLDAAAQLSRDTVLARMKLWLE
DESRKKVGQHLKYDAHVFANHDIALRGIEHDTMLESYVLESHRNHGMDALAERVLHLKTI
TYEAVCGKGASQIGFDEVPLDRATAYAAEDADVTLRLHRTLFPKVAEDDKLRYVYEQIEM
PTSIVLQKMERNGVLIDADRLAKQSNELGLRLIELEAEAHKLAGQPFNLGSPKQIGDIFF
NQMKLPVIKKTASGAPSTDEEVLQKLAEDYPLPKLLLDYRGLAKLKSTYTDKLPKMVNPR
TGRVHTTYGQATAVTGRLASTDPNLQNIPVRTEEGRRIREAFIAPEGSVIVSADYSQIEL
RIMAHLSQDEGLMRAFREGQDVHRATAAEVFNVTPLEVTPDQRRVAKVINFGLIYGMSAF
GLASNLGIGRDAAKLYIDRYFARYPGAANYMEETRQSAREHGYVETVFGRRLWLPDINGG
NGPRRQAAERAAINAPMQGTAADLIKLSMLAVQGWLEAEAMRSRLVMQVHDELVLEVPQD
ELAVVRERLPELMCSVATLRVPLVAEVGVGANWEEAH
NT seq
2814 nt
NT seq
+upstream
nt +downstream
nt
atgtcggaaagtcaagaaacgctgttgctcgtcgatggctcgagttatctgtaccgtgcc
tatcacgcactgcccgacttgcgaaacggagaagggtttcctacgggggccatctacggc
atcgtgaacatgctgcgcaaactgcgcaacgactatccggccaagtatagcgcttgcatt
ttcgacgccaaaggcaagacctttcgcgacgacctctatccggcctacaaggagcatcgc
gcgcccatgccggacgacctgcgcgcgcagatcgaacccatccacgaagccgtgcgggca
ttgggttggccgattctggtgatcgaaggtgtcgaggccgacgatgtgatcggcaccctg
gctgaacgggctgctcgcgaaggcgttcgcaccatcgtctcaacgggtgataaggacctc
gcccaactggtgaatgaccacgtgacgctggtcaacaccatgaccaacgaaacgctcgac
ccggccggcgtgcaagcgaagttcggcgtgccgccggagcgcatcgtcgactatctctct
ctgattggcgacaccgtggacaacgtgccgggtgtgcccaaggtgggcccgaagaccgcg
gtgaaatggctgacggaattcggctcgctcgacaacgtcatcgcgcgtgcaggcgagatc
aagggcgtggtgggcgagaacctgcgcaacacgctcgagtggctgcccaagggccgcgaa
ctgctgacggtgaagctcgactgcgacctcagcaaagaggtgccgacattcgatgcactg
atcgacggcggcgaagacaaatccaagctcgtcgatttcttctcgcgttatggtttcaag
acgtggctgcgcgaggcttctggcgaggccctgcccgatacgcgcagcgtgggtgccgca
cgcaaggctgcaacgcccgtgaagaattacgccggcgaggcggcacaactgcaagcacag
gccaacctgttcgatgtggaagcgccgcccgatgagatcaagtacgagacggtgacgacc
gaggcgcagcttgaatcgtggatgcaacgcctggacgaagtggatctcgtctgcatcgat
accgagacgacgtccattgacccgatgctcgcgcagttggtggggatttcgctgtcggtc
aagccgggcgaggcttgctacattccggtggcgcatcgcgggccggatgtggccgggctc
gatgcagcggcgcagctctcgcgcgacaccgtgctcgcgcgcatgaagctgtggctcgaa
gacgaatcacgcaagaaggtcggccagcacctgaagtacgacgcgcatgtgtttgccaac
cacgacatcgcgctgcgcggcatcgagcacgacacgatgctcgaatcgtatgtgctggag
tctcaccgcaatcacggcatggatgcactggccgagcgggtgctgcatttgaagacgatc
acttacgaggccgtgtgcggcaagggcgcatcgcagatcggctttgacgaggtgccgctc
gatcgcgcgaccgcgtacgcggcggaagacgccgatgtcacgctgcgcctgcatcgcacg
ctgttccccaaggtggccgaagacgacaagctgcgctacgtctacgagcagatcgaaatg
cccacctccatcgtgctgcagaagatggagcgcaacggcgtgctgatcgatgccgaccgg
ctggccaagcagagcaacgagctgggcttgcgtctgatcgagctggaagccgaggcgcac
aagcttgccggtcagccgttcaacctcggttcgcccaagcagatcggcgacatcttcttc
aaccagatgaagctgccggtcatcaagaagaccgcgagcggtgcgccgtcgaccgacgaa
gaggtgctgcaaaagctggccgaagactatccgctgccgaagctgctgctcgactaccgg
ggcctggccaagctcaagtcgacctacaccgacaagctgccgaaaatggtcaacccgcgc
accgggcgggtccacaccacctacggtcaggcgacggcggtgacggggcgtctggcctcg
accgatccgaacctgcaaaacattccggtgcgtacggaagaggggcggcgcattcgggaa
gcattcatcgcaccggagggcagcgtcatcgtatcggccgactactcgcagattgagctg
cgcatcatggcgcatctgtcgcaggacgaaggcctgatgcgcgcattccgtgagggccag
gacgtgcaccgcgccacggccgccgaagtgttcaacgtgacgccgctggaggtgacgccg
gaccagcgccgcgtggccaaggtcatcaacttcggtctgatctacggcatgagcgcgttt
ggactcgccagcaacctgggcattggacgagacgccgccaagctttatatcgaccgttac
ttcgcccgctaccccggcgccgcgaactacatggaagaaacccgccagagcgcgcgcgag
catggctacgtggaaacggtcttcggccgtcgcctgtggctgccggacatcaacggcggc
aacggcccgcgccgccaggctgcagaacgcgccgccattaacgcgcccatgcagggcacg
gcggctgacctgatcaagctgtcgatgctggcagtgcaaggctggctcgaagccgaagcg
atgcgctcgcgcctggtcatgcaggtgcacgatgaattggtactggaagtcccgcaggac
gagcttgcagtggtgcgcgagcgcctgccggagttgatgtgcagtgtcgcaacgctgcgc
gtacccctggtggccgaagtcggcgtaggcgcgaactgggaagaagcacactga
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