Ralstonia pickettii 12D: Rpic12D_2047
Help
Entry
Rpic12D_2047 CDS
T00925
Name
(GenBank) UvrD/REP helicase
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03420
Nucleotide excision repair
rpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rpic12D_2047
03430 Mismatch repair
Rpic12D_2047
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_2047
Enzymes [BR:
rpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rpic12D_2047
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rpic12D_2047
MMR (mismatch excision repair)
Other MMR factors
Rpic12D_2047
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
PcrA_UvrD_tudor
AAA_12
Viral_helicase1
AAA_30
AAA_11
Motif
Other DBs
NCBI-ProteinID:
ACS63326
UniProt:
C6BKK7
LinkDB
All DBs
Position
1:complement(2181379..2183739)
Genome browser
AA seq
786 aa
AA seq
DB search
MSDLLANLNPEQRAAITLPDESALILAGAGSGKTRVLTTRIAWLIQSARVSPSGVLAVTF
TNKAAKEMTARLQAMLPINTRAMWIGTFHGLCNRLLRAHFRDAGLPQTFQILDTQDQLSA
VKRLLKSLNIDDEKYPPKNVQYFINGAKEQGLRAGDLEIANEYDRRMADLYAAYDAQCQR
EGVVDFAELLLRCYELLRYNDAIRAHYQRRFKHILVDEFQDTNKLQYAWLKILAGLGEPG
VTPNAIFAVGDDDQSIYAFRGANVGNMVDFEREFRVEHRIKLEQNYRSHGHILDTANHLI
SHNTRRLGKNLRTDAGHGEPVRVYQAATDGQEAGWIVDEIRDRIATGMSRSEIAILYRSN
AQSRVIEHALFSAGIPYKVYGGLRFFERAEIKHALAYLQLLENPDNDAAFGRVVNFPARG
VGARSLEQLQDAARLYGISLAAAVPYLTGAAGTKLSAFVRLIEQMRADTRQMTLPEIVQH
VIHASGLITHYQGEKEGQDRIENLQELVTAAQAFVAEEGYGVDAIATALPVRHDAMLRIE
GGETDTASELVTDETPAEMTPLVAFLTHASLEAGDNQAQAGQDAVQMMTVHAAKGLEFHV
VFITGLEEGLFPHENSQMEKDGLEEERRLMYVAITRARERLYLSFAQSRVLHGQIRYHIR
SRFFDELPEDTLKWLTPQHAGYQATRRVQGDTAWGKDWFKRPERGDDDAYTGRPTGGMDT
GKNYADAKRAEATGFRVGQSVFHNKFGEGVITTLEGEGAEARAQIKFNRHGVKTLALGIA
KLDPIN
NT seq
2361 nt
NT seq
+upstream
nt +downstream
nt
atgtctgacctgctcgccaatctgaaccccgaacaacgcgctgccatcacgcttcccgat
gaatcggcgctgatcctggcgggggcgggcagcggcaagacgcgcgtgttgaccacccgc
atcgcgtggctgattcaaagtgcgcgggtgtcaccgtcgggtgtgctggccgtcacgttt
acgaacaaggcagccaaggaaatgacggcccgcctgcaggccatgctgccgatcaacacg
cgcgccatgtggatcggcaccttccacggcctgtgcaaccggttgctgcgcgcgcatttc
cgcgacgctggtttgccgcagacgttccagattctggatacgcaagatcagctgtccgcc
gtcaaacgcctgctcaagtcgctcaatatcgacgacgagaaatacccgcccaagaacgtc
cagtacttcatcaacggggccaaggagcagggcctgcgcgcgggcgatctggaaatcgcc
aacgaatacgaccgccgcatggccgacctctacgccgcttacgacgcgcaatgccagcgc
gaaggcgtggtcgattttgccgagctgctgctccgctgctacgaactgctgcgctacaac
gacgccatccgtgcgcactatcaacggcgtttcaagcacatcctggtggacgagttccag
gatacgaacaagctgcaatacgcctggctgaagatcctcgccgggctgggcgagcctggt
gtcacgcccaacgccatcttcgccgtgggcgacgatgaccagagcatctacgcgtttcgt
ggcgccaacgtaggcaacatggtcgactttgagcgcgaattccgcgtcgagcaccggatc
aagctggagcagaactaccgctcgcacggccatatcctggataccgccaaccacctgatc
tcgcacaacacgcgtcgtctgggcaagaacctgcgcaccgacgccggccatggcgagccg
gtgcgcgtctaccaggccgcgacggatgggcaggaagccggctggattgtcgatgagatc
cgcgaccggattgccaccggcatgtcgcgctcggaaatcgccatcctgtatcgcagcaac
gcgcagtcgcgggtgatcgagcatgccctgttctcggccggcatcccgtacaaggtgtac
ggcggcctgcgcttttttgagcgcgcggaaatcaagcatgcgctggcgtatcttcagctt
cttgagaatcccgacaatgacgcggcctttggtcgcgtggtgaatttcccggcgcgtggc
gtcggggcgcgctcgctggagcagctgcaggatgcggcgcggctctatggcatttcgctc
gcggcggcggtgccgtatctgacgggggcggcgggcaccaagttgtcggcgtttgtgcgt
ctgatcgaacagatgcgtgcggacacgcgtcagatgacgctgcctgaaatcgtgcagcac
gtcattcacgccagcggcttgatcacgcattaccagggcgagaaggaaggtcaggaccgc
atcgagaacttgcaggaactcgtgaccgcggcccaagccttcgttgccgaagagggctat
ggcgtcgacgcgattgcgaccgcgctgcccgtgcgccacgacgccatgctgcgcatcgaa
ggcggggagaccgataccgcttctgaactggtgaccgacgagacgcccgcggagatgaca
ccgctcgtggctttcctcacgcatgcctccctggaagctggcgataaccaggctcaggcc
ggccaggatgccgtgcagatgatgaccgtgcatgcggccaaggggctggaattccacgtc
gtcttcatcaccgggctcgaagagggcttgttcccgcacgaaaacagccagatggagaag
gacggccttgaggaagagcgccgcctgatgtacgtggcgatcacgcgtgcgcgtgagcgg
ttgtatctgtcgttcgcgcaaagccgcgtgctgcatggtcagatccgctaccacatccgc
tcacgcttctttgatgaactgcctgaagacacattgaagtggctgacgccgcagcacgcc
ggctaccaggcgacgcgccgtgtgcaaggcgataccgcatggggcaaggattggttcaag
cgcccagagcgtggcgacgacgatgcctacaccggccgcccgactggcggcatggacacc
ggcaagaactacgccgatgccaagcgcgcagaggccaccggcttccgggtcggccagtcg
gtgttccacaacaagttcggggaaggcgttatcacgacgctggaaggcgagggcgccgag
gcgcgtgcccagatcaagttcaaccgccacggggtgaagacgctggcgttgggtatcgcc
aagctcgacccgatcaactga
DBGET
integrated database retrieval system
