Ralstonia pickettii 12D: Rpic12D_2613
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Entry
Rpic12D_2613 CDS
T00925
Name
(GenBank) ribonuclease II
KO
K01147
exoribonuclease II [EC:
3.1.13.1
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
rpf03016
]
Rpic12D_2613
Enzymes [BR:
rpf01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.1 exoribonuclease II
Rpic12D_2613
Transfer RNA biogenesis [BR:
rpf03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
Rpic12D_2613
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNB
Motif
Other DBs
NCBI-ProteinID:
ACS63884
UniProt:
C6BDU9
LinkDB
All DBs
Position
1:complement(2750976..2753072)
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AA seq
698 aa
AA seq
DB search
MQLLFEEGGEIRAGTVLSQQGEAYQVELPSAKRTKVKSRDVLLQFAQPSAGELSQAAQAL
SAEIDLDFLWECASADEFGFTDLAGEYFGAGANATQQAALAIALHGSPIYFRRKGRGRYQ
RAPEDQLKAALAGLERKKQQAALQAEYEAELKAMRLPEAFRGKTLQLLFKPDKNSLEYKA
LDAACTALGLSPMRLMVAVGGIANARALHEARFLSECFPKGTGFPDVTVPEPAMELPAAD
VRAFSIDDVTTTEIDDAISVTPIDDATVRIGIHIAAPGFGIQRGEPLDVIARQRLSTVYF
PGDKITMLPESVVDRYTLQEGRACPALSLYVTVDRATWAVSASETRCETVTVAANLRHNL
LDDVITADALADGSGDYPFKAELAVLWPFVCALYDGRQQARIASGLKPEGAQKGDYSFYI
DPIPEAEGGGERVRIEQRKRGSPLDKIVAELMILANSTWGRMLADAGVPGIYRTQKAWGM
HRTRMQTYPAPHEGLGVAQYAWSTSPLRRYVDLVNQWQIAAVAQHGVTAKLIAPFKPKDA
DLLAAVADFEATYAAYADHQSTMERYWCLRWLQQENRTRMQAVVLKEGAVRFADIPLVTK
VPELAQTPRGTHVVLDILDTDEISLEVSCRVVEILAPEAGAQAEAEAIEEELAAAEAEAD
VPAEPQPAADGEEARAEADAAVAPPPQDGESGGTPAAA
NT seq
2097 nt
NT seq
+upstream
nt +downstream
nt
atgcagttgctgttcgaagaaggcggcgagatccgcgcgggcaccgtcttgtcccaacag
ggcgaggcctatcaggtcgagttgccgagcgccaagcgcaccaaggtcaagtcgcgcgac
gtgttgctgcaattcgcgcagccgtctgccggtgagttgtcgcaggcagcccaggcgctg
tcggcggagatcgacctcgattttctgtgggaatgcgcttcggccgatgaattcggcttt
accgacctggcaggcgaatactttggtgccggcgccaatgccacgcagcaagccgcgctg
gccatcgcgctgcatggctcgccgatctacttccgccgcaagggccgcggccgctatcag
cgcgcgcccgaagaccagctgaaggccgcgcttgcaggtttggagcgcaagaagcagcaa
gccgccctgcaggccgaatacgaagccgagctgaaggcgatgcgcctgcccgaggccttc
cgcggcaagacgctgcagctgctgttcaagccggacaagaacagcctcgaatacaaggcg
ctcgatgcggcgtgcaccgcgctgggcctgtcgccgatgcgcctgatggtggcggtcggc
ggcatcgccaacgctcgcgcgctgcacgaggcccgcttcctctcggaatgtttcccgaag
ggcaccggcttcccggatgtgaccgtgccggaaccggcgatggagctgcctgccgccgac
gtgcgcgccttctcgatcgacgacgtgaccaccacggaaatcgacgacgccatctcggtg
accccgattgatgacgccaccgtgcgcatcggcatccatattgccgcgccgggcttcggc
atccagcgcggcgaaccgctggacgtgattgcgcgtcagcgtttgtccaccgtgtatttc
cccggcgacaagatcacgatgctgccggagtcggtggtggatcgttacacgctgcaggaa
gggcgcgcatgcccggcgctgtcgctgtatgtgacggtcgaccgtgcaacgtgggcggtc
agcgccagcgagacgcgctgcgaaaccgtgaccgtggcggccaacctgcgccacaacctg
ctcgacgacgtgatcaccgccgacgcgctcgccgatggctcgggcgactatccgttcaag
gccgagctggcggtgctgtggccgtttgtgtgcgcgttgtatgacggccgccagcaggcc
cgcatcgccagcggcctcaagccggagggcgcgcagaagggcgattactcgttctacatc
gatccgattcccgaggcggaaggcggcggcgagcgcgtgcggatcgaacagcgcaaacgc
ggttcgccgctggacaagatcgtcgccgagctgatgatcctcgccaacagcacgtggggc
cgcatgctggccgacgccggggtgccgggcatctatcgcacgcagaaggcgtggggcatg
caccgcacgcgcatgcagacgtatccggcgccgcatgaaggcctgggcgtggcgcagtac
gcgtggagcacctcgccgctgcgtcgctatgtcgatctggtcaatcaatggcagatcgca
gcggtggcgcagcatggcgtgacggccaagctgatcgcgccattcaagcccaaggatgcc
gacctgctggctgccgtggccgacttcgaagccacctacgctgcctatgccgaccaccag
tcgaccatggagcgctattggtgcctgcgctggctccagcaggaaaaccgaacgcgcatg
caggccgtggtgctcaaggaaggcgccgtgcgattcgccgacattccgctggtgacgaag
gtgccggaactggcgcaaacgccacgcggtacgcacgtcgtgctcgatatcctggacacc
gacgagatcagcctggaagtgtcgtgccgcgtggttgaaatcctcgcgcccgaagcgggc
gcacaagctgaagccgaagccattgaagaagaactggccgcggcagaggctgaggctgat
gtgccggctgagccacaacctgccgcggatggggaagaggctcgcgcagaagccgacgcg
gctgtggcgccgccgccgcaagacggcgagagcggtggaacgcctgccgctgcctaa
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