Ralstonia pickettii 12D: Rpic12D_2642
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Entry
Rpic12D_2642 CDS
T00925
Name
(GenBank) two component, sigma54 specific, transcriptional regulator, Fis family
KO
K02667
two-component system, NtrC family, response regulator PilR
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
Rpic12D_2642
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02022 Two-component system [BR:
rpf02022
]
Rpic12D_2642
02035 Bacterial motility proteins [BR:
rpf02035
]
Rpic12D_2642
Two-component system [BR:
rpf02022
]
NtrC family
PilS-PilR (type 4 fimbriae synthesis)
Rpic12D_2642
Bacterial motility proteins [BR:
rpf02035
]
Pilus system
Twitching motility proteins
Rpic12D_2642
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Response_reg
Sigma54_activ_2
AAA_lid_14
HTH_8
AAA_5
AAA_16
FleQ
HTH_50
HTH_28
Peptidase_C15
AAA_19
Myosin_head
DUF2617
Motif
Other DBs
NCBI-ProteinID:
ACS63913
UniProt:
C6BDX8
LinkDB
All DBs
Position
1:complement(2785244..2786872)
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AA seq
542 aa
AA seq
DB search
MPKAAIVREPILVVDDEADLRELLEISLRRMGHDVVLASGLAEAREALSRQRFALVLTDM
RLGDGLGIELVRQLSATADRTPVAVITAYGSAENAVEALKAGAFDYIAKPLSLDQLRSLV
LNALGRQQRDPDPGNADLAERTNDLLPGHSAAMQEVRRSLMRLARSMAPVVISGESGSGK
ERAARAIHALSARAARPFVAVNCGAIPENLMEAEFFGYVKGAFTGADTDRQGFFQAANGG
TLMLDEVADLPLTMQVKLLRALQERRVRKIGESREDPVDVRVVCASHQNLARLVAAGRFR
EDLFYRLNVLELRMPTLRERAEDVPVLAGVLLEQLASRYGDPRPKRLTRPALQQLCAYPF
PGNVRELENLLERAYAFAEGESIDVDDLGALGAEIERSPLFHRTREAQQAAAAGNHALAP
SPMAGWPDAVYMPAPVPSPMGMPQPLAPSEPAPVARPAEPTLPNVALPIDLPAYLESVER
NVILAALDQTGFNRTAAAKLLGLSFRQLRYRMQQLGIRDPRDIEASPGSVGEPAGNGLNG
DA
NT seq
1629 nt
NT seq
+upstream
nt +downstream
nt
atgcctaaagccgccatcgttcgcgaacccattctcgtcgtcgatgacgaagccgacctg
cgcgagctgctggagatttccctgcgccgcatggggcacgacgtcgtgcttgccagcggg
ctggccgaggcgcgcgaagcgctgtcccggcagcgctttgcactggtgctgaccgacatg
cgcctgggcgatggcctgggcatcgaactcgtgcgtcagctgtctgctacggccgaccgc
acgccggttgccgtcatcaccgcttatggcagcgcagagaacgcggtcgaagcgcttaag
gcgggcgcgttcgattacatcgccaaaccgctctcgctcgaccagcttcgcagcctcgtg
ctgaatgcgctgggccgccagcagcgcgatcccgatcccggtaatgccgacttggccgaa
cgcaccaatgatctgctgcccggccactccgccgcgatgcaggaagtgcgccgctcgttg
atgcgcctggcgcgcagcatggcgccggtggtgatcagcggcgaatccggcagcggcaag
gagcgtgcggcccgcgccatccatgcgctgtcggcgcgtgccgcgcgcccattcgtggca
gtgaactgcggcgcgattcccgagaacctgatggaagccgagtttttcggttacgtaaag
ggcgcttttaccggcgccgacaccgatcgccaaggcttcttccaagcggccaacggcggc
acgctcatgctcgacgaggtggccgacctgccgctcacgatgcaggtgaaattgctgcgc
gcgctgcaggagcgccgcgtgcgcaagatcggcgagagccgcgaagatcccgtcgacgtg
cgcgtcgtgtgtgcgagccaccagaatctggcacggctggtggccgccggccgtttccgc
gaagacttgttctaccgcctgaacgtgctcgagctgcgcatgcccacgctgcgcgagcgg
gccgaagacgtgcccgtgctggccggcgtgctgctcgaacaactcgccagccgctacggc
gatccgcgccccaagcgcctgacgcgtccggcgcttcagcaactgtgcgcatatcccttc
cccggcaacgtgcgtgaactggagaacctgctggagcgtgcgtacgcgtttgcggaaggc
gagtcgatcgacgtggatgaccttggcgctctcggcgccgagatcgagcgctcgccgctg
tttcaccgcacgcgcgaggcgcagcaggccgctgcggcaggcaatcacgcgttggcgccg
tcgccaatggcgggctggcctgatgctgtctacatgccggcccccgtgccaagcccgatg
gggatgccgcaaccgctggcaccgtccgagccggcaccggttgcgcggccggctgaaccc
accctgccgaacgttgcgctgccgatcgatctgccggcctacctggagtcggtcgagcgc
aacgtgatccttgccgcgctggaccagacgggtttcaaccgcaccgcagcggccaagttg
cttgggctgtcattccgtcagttgcgctatcgcatgcagcaacttggcattcgtgacccg
cgagacattgaagcgtcgccgggcagcgtcggcgaaccggccggaaatgggctgaacggc
gatgcctga
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