Ralstonia pickettii 12D: Rpic12D_2728
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Entry
Rpic12D_2728 CDS
T00925
Name
(GenBank) UDP-N-acetylmuramoylalanyl-D-glutamyl-2,6-diaminopimelate/D-alanyl-D-alanyl ligase
KO
K01929
UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-alanine ligase [EC:
6.3.2.10
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00300
Lysine biosynthesis
rpf00550
Peptidoglycan biosynthesis
rpf01100
Metabolic pathways
rpf01502
Vancomycin resistance
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
Rpic12D_2728
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
Rpic12D_2728
09160 Human Diseases
09175 Drug resistance: antimicrobial
01502 Vancomycin resistance
Rpic12D_2728
Enzymes [BR:
rpf01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.10 UDP-N-acetylmuramoyl-tripeptide---D-alanyl-D-alanine ligase
Rpic12D_2728
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Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
Lipase_GDSL_2
Motif
Other DBs
NCBI-ProteinID:
ACS63999
UniProt:
C6BEI7
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All DBs
Position
1:complement(2880683..2882119)
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AA seq
478 aa
AA seq
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MSAATVMMHATDAAAWMAGAHLAGPDAAILRVTTDSRSVQPGDLFVALIGERFDAHDFLP
EVVARGAAAVLVSRPPAATLDMTNVAVLTVADTRIGLGQLAAGWRRQFPIPVVAVTGSNG
KTTVKEMISAIFAQAVGEDARLATAGNFNNDIGLPLTLFRLNAQHKLAVLELGMNHPGET
AVLAAIAQPTVAMINNAQREHQEFMVSVEAVAEEHAAVLAALPANGVAVYPRDAANGGEY
ARVWKAAAGSRRVLDFGMDAGAVTGTVVDTADGQRIEVQAPGQRFVITLPLLGLHNARNA
LAATACALAAGVAPEVIAQALGNFAPVKGRLQRKQGTHGGLVIDDTYNANPDSMRAAIDA
LVTLPAPRWLVLGDMGEVGSKGPAFHEEIGAYARARGIDAVLATGELARHTVDAFGPGAQ
HFASAEDLIEHGVPAIAPAATVLVKGSRFMRMERIVEALVLKDPVADSPAGSNTQQQH
NT seq
1437 nt
NT seq
+upstream
nt +downstream
nt
atgagcgctgcgaccgtgatgatgcacgccaccgacgccgccgcctggatggccggcgcc
catcttgccggccccgatgcagccatcctgcgcgtgacgaccgacagccgctccgtgcag
cccggcgacctgttcgtcgcgctcatcggcgagcgcttcgatgcacacgacttcctgccc
gaagtggtggcgcgtggcgctgctgccgtgctggtgtcacgcccaccggccgcaacgctg
gatatgaccaacgtggccgtgctgaccgttgccgatacgcgcatcgggctcggccagctt
gccgccggctggcgacgccagttcccgattcccgtcgtcgccgtgacgggcagcaacggc
aagaccacggtcaaggagatgatctccgcgatcttcgcgcaggctgtcggcgaagatgcc
cgcctggcgaccgccggcaacttcaacaacgacatcggcctgccgctcacgctgttccgc
ctgaacgcgcaacacaagctcgccgtgcttgaactcggcatgaaccatccgggcgaaacg
gctgtattggccgccattgcccagccgaccgtggcgatgatcaacaacgcgcagcgcgag
caccaggaattcatggtcagcgtggaagcggtggctgaagaacacgccgctgtgctggcc
gcgttgccggccaatggcgtggcggtgtatccgcgcgatgcggccaacggtggcgaatat
gcgcgggtgtggaaagccgcggcgggctcgcggcgcgtgctcgatttcggtatggatgcc
ggggccgtgacgggcaccgtggtggacaccgccgacgggcaacgcattgaagtgcaggct
ccgggccagcgtttcgtcatcaccttgccgctgctgggcctgcataacgcacgcaatgcg
ctggcggcgacggcgtgcgcgctggcagccggtgtcgctcccgaggtgattgcgcaagcg
ctgggcaactttgcacccgtcaaggggcggttgcagcgcaagcagggcacgcatggcggc
ctggtcatcgacgacacgtacaacgcgaacccggattcgatgcgcgccgcgattgacgcg
cttgtcacgctgcccgcgccgcgctggctggtgctgggtgacatgggcgaggtgggctct
aaggggccggcattccacgaagagatcggggcctacgcgcgcgcgcgcggcatcgacgca
gtgctggcaaccggcgagcttgcgcgccacacggtcgatgccttcggcccgggcgcacag
cattttgcgtcggcggaagacttgattgaacacggtgtgcccgccattgcgccggccgcg
acggtattggtgaagggatcgcgcttcatgcggatggaacgcattgtggaagcgctggtc
ttgaaagacccggtagcggattcgccagccggttccaacacacaacagcagcattaa
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