Ralstonia pickettii 12D: Rpic12D_2739
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Entry
Rpic12D_2739 CDS
T00925
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00061
Fatty acid biosynthesis
rpf00071
Fatty acid degradation
rpf01100
Metabolic pathways
rpf01212
Fatty acid metabolism
rpf02024
Quorum sensing
rpf04146
Peroxisome
Module
rpf_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
Rpic12D_2739
00071 Fatty acid degradation
Rpic12D_2739
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
Rpic12D_2739
09145 Cellular community - prokaryotes
02024 Quorum sensing
Rpic12D_2739
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpf01004
]
Rpic12D_2739
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
rpf04147
]
Rpic12D_2739
Enzymes [BR:
rpf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
Rpic12D_2739
Lipid biosynthesis proteins [BR:
rpf01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
Rpic12D_2739
Exosome [BR:
rpf04147
]
Exosomal proteins
Exosomal proteins of breast milk
Rpic12D_2739
Exosomal proteins of breast cancer cells
Rpic12D_2739
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
ACS64010
UniProt:
C6BEJ8
LinkDB
All DBs
Position
1:complement(2892500..2894209)
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AA seq
569 aa
AA seq
DB search
MDKPWLKQYPAGVPAEIDASQYRSLAHLLEDSFQKNRNRRAFECMGKVLTYGELDTLSRQ
LAAWLQSRGLALGARVALMMPNVLQYPVALAAVLRAGYVVVNVNPLYTPRELEHQLKDSG
AEAIIILENFATTLQQVLPNTPVKHIVVASMGDLLGGLKGMLVNFVVRSVKKMVPAWELP
NCIRFNTALEEGAKQTLKPTSVGPDDVAFLQYTGGTTGVSKGATLLHRNIVANVLQSEAW
MNPALTKPGRDGRMLAADEEIVTITALPLYHIFALTVCCLLSMRKGGLAVLIPNPRDIPG
FIKVLKQYRFHMFPAVNTLYNALLNNPEFKDVDCSNLRVANGGGMAVQEAVAKKWLEVTG
CPIIEGYGLSETSPSAICNPTDTDKFSGTVGLPIPGTEIAIRDDEGRDLPIGQPGEICIR
GPQVMAGYWKRPDETAKVMYADGFFKTGDVGVMDERGYTKIVDRKKDMILVSGFNVYPNE
IEGVVAMCPGVLEVAAVGVPDVHSGEVVKLFVVRRDPTLTEQKLQEFCKDQLTGYKRPKF
IEFRNELPKTNVGKILRRELRDEAMKKRA
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggataagccgtggctgaagcaatatcccgccggggtgccggccgagatcgatgcatcg
cagtatcgatcgctggcccatctgcttgaggattccttccagaagaaccgtaaccgccgt
gcatttgaatgcatgggaaaggtgctgacctacggcgagctggatacgctttcgcgccaa
ctggcggcgtggctgcaatcgcgcggtctggcgcttggcgcgcgcgtcgcgttgatgatg
ccgaacgtgttgcagtaccccgtggcgctggccgccgtgctgcgtgccggctatgtggtc
gtcaacgtcaatccgctttacaccccgcgcgaactggaacaccagctcaaggacagcggc
gccgaagccatcatcatccttgagaatttcgcgacgacgctgcagcaggtgctgcccaat
acgccggtcaaacacatcgtggtggccagcatgggcgacttgctgggcgggctgaagggc
atgctggtcaatttcgtcgtgcgcagcgtcaagaagatggtgccggcgtgggaactgccc
aactgcatccgcttcaacaccgcgctggaagaaggcgccaagcagacgctcaagccgact
tccgtcggccccgacgacgtggccttcctgcaatacacgggcggcacgaccggcgtgtcg
aagggtgcgacgctgctgcatcggaacatcgtcgcgaacgtgttgcaatcggaagcctgg
atgaacccggcgctcaccaagcctggtcgcgatggccgcatgctggccgccgacgaagag
atcgtcacgatcaccgcgctgccgctgtatcacatcttcgcgctgacggtgtgctgcctg
ctgtcgatgcgcaagggcgggctggccgtgctgatcccgaatccgcgggacatcccgggc
ttcatcaaggtgctcaagcagtaccgcttccacatgttcccggccgtgaacacgctgtac
aacgcgctgctgaacaaccccgaattcaaggatgtggactgctcgaacctgcgtgtggcc
aacggtggcggcatggcggtgcaggaggccgtggccaagaagtggctcgaggtgacgggg
tgcccgatcatcgaaggctatggtctgtcggaaacctcgccgtcggccatctgcaacccc
acggataccgataagttctcgggtaccgtcggcctgccgattcctggcacggaaatcgcc
attcgcgacgacgaaggccgcgacttgccgatcggccagccgggcgaaatctgcatccgc
ggcccgcaagtcatggctggttactggaagcgcccggacgagaccgccaaggtcatgtac
gccgacggcttcttcaagaccggcgacgtcggcgtgatggacgagcgcggttacaccaag
atcgtcgatcgcaagaaggacatgattctggtgtcgggcttcaacgtgtacccgaacgag
atcgaaggcgtggtggcgatgtgcccgggcgtgctggaagtggccgccgtgggcgtgccc
gacgtccactcgggcgaggtggtgaagctgttcgtggtgcgccgcgacccgacgctcaca
gaacagaagctgcaggagttctgcaaggaccagctcaccggttacaagcgccccaagttc
atcgagttccgcaacgagctgccgaagaccaacgtcggcaagatcctgcgccgtgaactg
cgcgacgaggcgatgaagaagcgtgcctga
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