Ralstonia pickettii 12D: Rpic12D_2792
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Entry
Rpic12D_2792 CDS
T00925
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03420
Nucleotide excision repair
rpf03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
Rpic12D_2792
03430 Mismatch repair
Rpic12D_2792
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_2792
Enzymes [BR:
rpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
Rpic12D_2792
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
Rpic12D_2792
MMR (mismatch excision repair)
Other MMR factors
Rpic12D_2792
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
Viral_helicase1
UvrD_C
UvrD_C_2
SpnB_Rossmann
AAA_30
Phage_rep_org_N
Motif
Other DBs
NCBI-ProteinID:
ACS64063
UniProt:
C6BF21
LinkDB
All DBs
Position
1:2958728..2960485
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AA seq
585 aa
AA seq
DB search
MVGEAVAAAAPEKTADERIAECLAEGRSFVLDAGAGAGKTYSLVEGLKKLCAPTVADRLR
RDGQQIACITYTNVAKDQVIDRIQGNSLVRVSTIHDFLWSTLQPHQQALRQALLDFNAAL
PTGSSRRVDQAELAARVAARLEVKYSDRGSKFLEGRIYHDDLLSIARIAYTRYDKLARIV
ASRYPYIFIDEYQDTSEAVIDILLCRMLPLAGNKLVLGFFGDKMQNIYHHGEHKGIGELP
AELAAPLEVIVKRENRRCSLRVMDVLNNIRTDITQIPGSNNAQGDVAYIRVAAGADEAGL
QRARDLLTDTLNWDLASQGTRELYLTHRLIARKAGFADLLQAFTDRGSFAKDALTDGSDR
RIAFFLEKVEPLALAWEKGQIGETLGRLHGAGHRLASRTAKSGVRDALNALTAKRAAGTV
REVLETIRDRQLFPLTDDLALRLVNTQPILTAEMDDAAKEREQLEATLYGAFFALPYQQV
AAFARFFMTSTPFATKHGVKGDEFDTVLVVLDDSGAAWTFYSFDKYLSGADETAKPERAK
RSRNVFYVCCSRARQRLAVIDLTGASAAKDERMRTLFGLDRCYEV
NT seq
1758 nt
NT seq
+upstream
nt +downstream
nt
atggttggcgaagcagtagccgcggccgcgcccgaaaagacagcggacgagcgcatcgcc
gaatgcctcgccgagggtcgcagtttcgttctcgacgctggtgccggcgcgggcaagact
tactctctcgtcgagggtctgaagaagctctgtgcaccgacggtcgccgaccggctcagg
cgtgacgggcagcagatcgcctgcatcacctataccaatgtggccaaggaccaggtgatt
gaccgcatccagggcaactctttggtgcgtgtctcgactatccatgacttcctatggagc
acgttgcagccccaccagcaagcccttcggcaggctctgctcgatttcaatgctgcactc
cccacggggagctcgcgtcgggttgatcaagcggaactagcagcaagggtcgccgcccgg
cttgaggtgaagtactcggaccggggctccaagttcctcgagggtcggatctatcacgac
gacctgctttcgatcgcgcgcatcgcctacaccagatacgacaagctggcgcgcatcgtg
gcgagccgctacccctacatcttcatcgacgagtaccaggacaccagcgaagcagtgatc
gacatcctgctttgccggatgctaccgctggctggcaacaagctcgtgctcggatttttc
ggtgacaagatgcagaacatctatcaccatggagaacacaaggggatcggcgaacttcca
gctgagctggcagcgccacttgaggtcatcgtcaagcgcgagaaccgtcgttgctcgctg
cgcgtcatggatgtgttgaacaacatccggaccgacatcacgcagatacctgggagcaac
aacgcgcaaggcgacgtagcgtacatccgcgttgcggctggtgccgatgaagcgggtctt
caacgcgcacgcgacctgctgaccgacaccttgaactgggacctggcaagccaaggaaca
cgcgagctttacctcacccatcggctgattgcccgcaaggctggttttgctgacttgctt
caggccttcacggatcgtgggtcctttgccaaggatgccctcaccgacggctctgatcgg
cggattgcgttcttcttggagaaggttgaaccgctggccctggcctgggagaaggggcag
atcggcgagacgctgggccggctccatggcgcggggcaccgactagccagtcgcacagca
aagtctggcgtgcgcgatgcgcttaatgccctgacggcaaagcgagctgccggcacagtc
cgtgaagtgcttgagacgatccgcgaccgccagctattcccactgaccgatgacttggcc
ctccggcttgtaaacacgcagcccatcctcactgcggagatggatgatgccgcgaaagag
cgcgagcaactggaggcgacgctgtacggggccttcttcgcgcttccctaccagcaggtc
gccgccttcgcccggttcttcatgaccagcacgccgtttgctaccaagcatggcgtgaag
ggagacgagttcgataccgtgctggtcgtgctggacgactccggcgccgcgtggaccttc
tattcgttcgacaagtacctgtccggtgcggatgagacggcgaaaccagagcgcgcaaag
cggtctcgcaatgtcttctacgtctgctgctctagggcccggcagaggctggcggtgatc
gatctcaccggtgcttccgcggcgaaggacgagcgaatgcgcacgctgttcggactggac
cgctgctatgaggtatag
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