Ralstonia pickettii 12D: Rpic12D_2967
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Entry
Rpic12D_2967 CDS
T00925
Name
(GenBank) DNA-directed RNA polymerase, beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
Rpic12D_2967
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
rpf03021
]
Rpic12D_2967
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_2967
Enzymes [BR:
rpf01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
Rpic12D_2967
Transcription machinery [BR:
rpf03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
Rpic12D_2967
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
Rpic12D_2967
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_1
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
RAD51D_N
Motif
Other DBs
NCBI-ProteinID:
ACS64237
UniProt:
C6BFW8
LinkDB
All DBs
Position
1:complement(3122189..3126295)
Genome browser
AA seq
1368 aa
AA seq
DB search
MAYSFTEKKRIRKSFAKRATVHQVPFLLATQIQSYAQFLQENTPVAQRKSEGLQAAFNAI
FPIVSHNGLARMEFVSYHLSNPPFDVKECQQRGLTFHSALRAKVRLIINDRENPTKVKEI
KEQEVYMGEIPLMTSTGSFVINGTERVIVSQLHRSPGVFFEHDKGKTHSSGKLLFSARII
PYRGSWLDFEFDPKDILYFRVDRRRKMPVTILLKSIGLTPEQILAHFFVFDNFTLKTEGA
LMEFVPERLRGEVARFDISDKNGKVVVEKDKRINAKHIRDLDSAGTKLISVPEDYLLGRV
LAKNIVDPDTGEVLANANDELTEGVLEKLRDAGVKEIQTLYTNDLDQGPYMSATLRTDDT
ADQTAARIAIYRMMRPGEPPTEDAVEALFQRLFYSEDSYDLSRVGRMKVNSRLNRSTGTG
PMVLTDEDILDTIKLLVNLRNGKGEVDDIDHLGNRRVRCVGELAENQFRAGLSRVERAVK
ERLGQAETENLMPHDLINSKPISSAIREFFGSSQLSQFMDQTNPLSEVTHKRRISALGPG
GLTRERAGFEVRDVHPTHYGRVCPIETPEGPNIGLINSLALYAQLNDYGFLETPYRKVEN
GKLTDQVDYLSAIEEGKYVVAQANATLDKDGNLIDELVSAREGSERETRMVTPDRVQYID
VAPSQIVSAAASLVPFLEHDDANRALMGANMQRQAVPCLRADKPLVGTGVERTVAVDSGT
AVQATRGGVVDYVDANRVVIRVNDDEAVAGEVGVDIYNLIKYTRSNQNTNINQRPMVKVG
DIVARGDVIADGASTDMGELALGQNMLVAFMPWNGYNFEDSILISERVVAEDRYTSIHIE
ELSVVARDTKLGPEEITRDISNLAEAQLARLDESGITYIGAEVEAGDVLVGKVTPKGETQ
LTPEEKLLRAIFGEKASDVKDTSLRVPSGMSGTVIDVQVFTREGVVRDKRAQSIIDEELK
RYRLDLNDQLRIVEGDAFQRLERLLVGKVANGGPKKLAKGTALTKEYLGDLDKWHWFDIR
PAEDEVALQLEAVKVAIEQKRHDFDLAFEEKRKKLTQGDELPPGVIKMVKVYLAVKRRLQ
PGDKMAGRHGNKGVVSKITPIEDMPYMADGTPADIVLNPLGVPSRMNVGQILETHLGWAA
RGLGERIGNMLKAQAKAAEIRKLLEQIYNESGKVEDLDSLSDAEILELAENLKKGVPFAT
PVFDGAHEDEIRRMLDLAYPEDIAKEKGLTASKQQVTLFDGRTGEAFERPVTLGVMHMLK
LHHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYGASYVLQEMLTVK
SDDVNGRTKVYENIVKGEHSIDAGMPESFNVLVKEIRSLGIDIDLERN
NT seq
4107 nt
NT seq
+upstream
nt +downstream
nt
atggcgtacagctttaccgagaaaaagcgtattcgcaagagtttcgcgaaacgcgcaacg
gttcatcaggttcccttcctgcttgccacccagattcaatcgtatgcccagttcttgcag
gagaacactcctgttgcacaacgcaagagcgaaggtttgcaagcggcgttcaacgccatt
ttccccatcgtgtcgcacaatggtctggcacgcatggagttcgtgtcgtaccacctgtcc
aacccgccgtttgacgtcaaggaatgtcaacagcgtggtctgaccttccactcggcgctg
cgcgcaaaagtgcgcttgatcatcaacgaccgcgagaatcccaccaaggtcaaggagatc
aaggagcaggaagtctacatgggcgaaattccgctcatgacctccaccggttcgttcgtg
atcaacgggacggaacgtgtgatcgtgtcccagctgcatcgttcgccgggcgtgttcttc
gagcacgacaagggcaagacgcacagctcgggcaagctgctgttctcggcgcggatcatt
ccgtaccgcggctcgtggctcgatttcgaattcgacccgaaggacatcctgtacttccgc
gtcgaccgccgccgcaagatgccggtgacgatcctgctgaagtcgattggcctgacgccg
gaacagatcctggcgcacttcttcgtgttcgataacttcacgctgaagaccgaaggcgca
ctgatggaattcgtgcccgagcgtctgcgcggtgaagtcgctcgcttcgacatttccgac
aagaacggcaaggtcgtggtcgagaaggacaagcgcatcaacgccaagcacatccgcgac
ctggattccgcgggcaccaagctgatcagcgtgccggaagactacctgctgggccgcgtg
ctggcgaagaacatcgtcgatccggacaccggtgaagtcctggccaacgccaacgacgaa
ctgaccgaaggcgtgctcgagaagctgcgtgatgccggcgtgaaggaaatccagacgctg
tacacgaacgacctggatcagggtccgtacatgtccgcgacgctgcgcacggacgacacg
gccgaccagaccgccgcgcgtatcgcgatctatcgcatgatgcgcccgggcgagccgccg
accgaagacgccgtcgaagcgctgttccaacgtctgttctacagcgaagactcgtacgac
ctgtcgcgcgttggccgcatgaaggtcaacagccgcctgaaccgctcgaccggtaccggc
ccgatggtgctgaccgacgaggacatcctcgacacgatcaagctgctggtgaatctgcgt
aacggcaagggcgaagtggacgatatcgaccacctcggcaaccgtcgcgtgcgttgcgtc
ggcgaactggcggaaaaccagttccgcgccggtctgtcgcgcgttgagcgtgccgtgaag
gaacgtctgggtcaggccgagacggaaaacctgatgccgcacgacctgatcaactcgaag
ccgatttcgtcagcgatccgcgagttcttcggttcgtcgcagctgtcgcagttcatggac
cagaccaacccgctgtcggaagtcacgcacaagcgtcgtatttcggcactgggcccgggc
ggtctgacgcgcgagcgtgcgggctttgaagtccgtgacgtgcacccgacccactatggc
cgcgtgtgcccgatcgaaacgccggaaggtccgaacattggtctgatcaactcgctggcg
ctgtacgcacagctgaacgactacggcttcctcgaaacgccgtaccgcaaggttgaaaac
ggcaagctgaccgaccaggtggattacctgtcggccatcgaggaaggcaagtacgtggtg
gcgcaggccaacgcgacgcttgacaaggacggcaacctgatcgacgagctggtttccgcg
cgcgaaggcagcgagcgtgaaacccgtatggtcacgccggaccgcgtgcagtacatcgac
gtggcaccgtcgcagatcgtgtcggctgcagcttcgctggtgccgttcctcgagcacgat
gatgcaaaccgtgcactgatgggcgcgaacatgcagcgtcaggccgtgccttgcctgcgt
gcagacaagccgctcgtgggtacgggcgtcgagcgcaccgtggcagtggactcgggtacc
gccgtgcaggcaacccgtggcggcgtggtcgactatgttgacgcgaaccgcgtggtgatc
cgcgtgaatgacgacgaagccgtggccggtgaagtcggcgtggacatctacaacctgatc
aagtacacgcgttcgaaccagaacacgaacatcaaccagcgtccgatggtcaaggtgggc
gacatcgttgcccgcggcgacgtgattgctgacggcgcctcgaccgacatgggcgagctt
gcgctcggccagaacatgctggtcgcgttcatgccctggaacggctacaacttcgaagat
tcgatcctgatctcggagcgcgtcgtggctgaagaccgctacacctcgatccacatcgag
gaactgtcggtcgtcgcccgcgacaccaagctcggaccggaagaaatcacgcgcgacatc
tcgaacctggccgaagcccaactggctcgcctggacgagtcgggcatcacgtacatcggc
gcggaagtggaagccggcgacgtgctggtcggcaaggtcacgcccaagggcgagacccag
ctgacgccggaagaaaagctgctgcgtgcgatcttcggtgagaaggcgtccgacgtgaag
gacacctcgctgcgcgtgccgtcgggcatgagcggtaccgtgatcgacgtgcaggtcttc
acgcgtgaaggcgtggtgcgtgacaagcgtgcccagtcgatcatcgacgaagagctgaag
cgctatcgcctggacctgaacgaccagctgcgtatcgtggaaggcgatgccttccagcgt
ctggagcgtctgctggtgggcaaggttgccaacggcggcccgaagaagctggccaagggc
accgcgctcacgaaggaatacctgggcgatctggacaagtggcactggttcgacatccgc
ccggcagaagacgaagtcgcgctgcagctggaagccgtgaaggttgccatcgagcagaag
cgccacgacttcgacctcgcgttcgaagagaagcgcaagaagctcacgcaaggcgacgaa
ctgccgccgggcgtgatcaagatggtcaaggtgtatctggccgtgaagcgtcgcctgcag
ccgggcgacaagatggccggccgtcacggtaacaagggtgttgtgtcgaagatcaccccg
atcgaagacatgccgtacatggccgacggcacacctgctgacatcgtgctgaacccgctg
ggcgtgccttcgcggatgaacgtgggtcagattctcgaaacccacctgggctgggccgcg
cgcggtctgggcgagcgcatcggcaacatgctcaaggcgcaagccaaggctgccgagatc
cgcaagctgctggagcagatctacaacgaaagcggcaaggttgaagatctggacagcctg
tccgacgctgaaatcctcgagctggccgagaacctgaagaagggcgtgccgttcgcgacg
ccggtgttcgatggtgcgcatgaggatgaaatccgccgcatgctggacctcgcctatccg
gaagacatcgcgaaggagaagggtctgaccgcttccaagcagcaggtcacgctgttcgac
ggtcgcaccggtgaagccttcgagcgtccggtcacgctgggcgtgatgcacatgctgaag
ctgcaccacttggtcgacgacaagatgcacgcgcgctcgaccggtccgtactcgctggtg
acgcagcagccgctgggcggtaaggcccagttcggtggccagcgtttcggtgaaatggaa
gtgtgggcactcgaagcgtacggcgcatcctacgtgctgcaggaaatgctgaccgtgaag
tcggatgacgtgaacggccggaccaaggtgtacgagaacatcgtcaagggcgagcactcg
atcgatgccggcatgccggaatcgttcaacgtgctggtgaaggaaatccgctcgctgggt
atcgacatcgacctcgagcgcaactaa
DBGET
integrated database retrieval system
