Ralstonia pickettii 12D: Rpic12D_3339
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Entry
Rpic12D_3339 CDS
T00925
Name
(GenBank) Lytic transglycosylase catalytic
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
rpf01011
]
Rpic12D_3339
Enzymes [BR:
rpf01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
Rpic12D_3339
Peptidoglycan biosynthesis and degradation proteins [BR:
rpf01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
Rpic12D_3339
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
SLT_L
TPR_16
Motif
Other DBs
NCBI-ProteinID:
ACS64603
UniProt:
C6BI07
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All DBs
Position
1:3520762..3522714
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AA seq
650 aa
AA seq
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MTLKAKAVYRAVALAFAGVVGMSVVGPTPLAMAAKRQAPQGIPANPDDAFVELRNAARRN
DVSRSWELADSLADYPIQSYVQYFRIKPQLYDASGYARTDAPEDEIRSFLQRYKGEAIAD
RLRNDWLLVLGKKRDWATFDAEYPNFVLKDDTQVECYALLSRAMKGQNVAADARNTLSDP
KGYGEGCVDLIGYLAQSNQFTRADVAWAARLSLEQNLVTQASRIAAVLPDGDRVDNDTLA
NVTRMARNDPSQATAYLLAQTGSLSREEQGAGWGVIGQYAAKKQTPDALDAYRRQLTLGG
DAYLSDESQEWRVRAALRAGDWKMVRQAVEKMRPSLRDRDPAWAYWYGRALKADNRNDDA
RQQFQSIAGQFNFYGQLAQEELGQRITVPPRTTVTDAEIDVMGRNHPGFGRAKKLYDLNL
RFEGNREWNWELRNMSDRELLAAAEYGRKLGLLDRTVNSADKTKAEHDFSLRFPTPYLNV
VQRNADAVGLDIAWAYGLIRQESRFIMDARSSVGASGLMQVMPETAKHIAKKIGLPGFRV
SQMSDIDTNVLLGTAYLSMILTNLDSSVTLATAGYNAGPGRPKRWRSTLTRPVEGAIFAE
TIPFNETRTYVKNVLSNATYYSALLTGRPQSLKDRLGKVVPESVTPDDLP
NT seq
1953 nt
NT seq
+upstream
nt +downstream
nt
atgacattgaaggccaaggcagtatatcgcgcggtcgcgctggcttttgcgggcgtggtg
ggcatgagcgtggtcggcccgacgccgctggcgatggccgccaagcggcaggcgccgcaa
ggcattccggccaatccggacgatgcatttgtcgagctgcgcaacgcggcccgccgcaac
gatgtgtcgcgcagctgggagctggcggatagcctcgccgattacccgatccagtcgtac
gtgcagtatttccgcatcaagccccagctgtacgatgccagcggctatgcccgcaccgac
gcgccggaagatgagatccgctcattcctgcaacgctacaagggcgaggcgattgccgac
cggttgcgcaacgactggctgctcgtgctgggcaagaagcgagattgggcgaccttcgac
gcggagtacccgaacttcgtgctgaaggacgacacgcaggtcgagtgctatgccctgctc
tcgcgcgcgatgaagggccagaacgtagccgccgacgcgcgcaacacgctgtcggatccc
aagggctatggcgaaggctgtgtcgacctgatcggctatctggcgcagtccaaccagttc
acccgcgcggatgtggcgtgggcggcgcggttgtcgctggagcagaaccttgtcacgcag
gcgtcgcgcattgcggcggtgctgccggacggcgatcgcgtggacaacgacacgctggcc
aacgtgacgcgcatggcgcgcaacgatccgtcgcaggcgacggcgtatctgctggcgcaa
accggcagcctgtcgcgcgaagagcaaggcgcgggctggggcgtcatcggccagtacgcc
gccaagaagcagacgcccgatgcgctggacgcctaccgccgccagttgacgcttggcggc
gatgcctacctctctgacgagtcgcaggagtggcgcgtgcgcgcggccctacgcgccggg
gactggaagatggtgcggcaggccgttgagaaaatgcgccccagcctgcgcgatcgggac
cctgcctgggcgtattggtatggccgcgcgctcaaggccgacaatcgcaacgacgatgcc
cgccagcagttccagtcgattgccgggcagttcaacttctatggccagctggcgcaggaa
gaactcggtcagcgcatcaccgtgccgccgcgcacgaccgtgaccgacgccgagatcgac
gtgatggggcgcaaccacccgggctttgggcgtgccaagaagctgtacgacctgaatctg
cgcttcgaaggcaaccgcgagtggaactgggagctgcgcaacatgagcgaccgcgagttg
ctggccgcagccgaatatggccgcaagctcggcctgctcgatcgcaccgtcaattcggcg
gacaagaccaaggccgagcacgacttctcgctgcgcttcccgacgccgtatctcaatgtg
gttcagcgcaacgccgatgccgtggggctggacattgcctgggcctatggcctgatccgc
caggagtcgcgcttcatcatggacgcccgttcgtcggtgggtgcctcgggcctgatgcag
gtgatgccggaaaccgccaagcacattgccaagaagatcggcctgccggggttccgcgtt
tcgcagatgagcgacatcgataccaacgtgctgctgggcaccgcgtacctgtcgatgatc
ctgacgaacctcgacagctccgtcacgctggcgaccgcgggctacaacgccggcccaggc
cgcccgaaacgctggcgctcgacgctcacgcggccggtggaaggcgcgatcttcgccgag
acgattccgttcaacgagacccgcacctatgtgaaaaacgtgctctcgaacgcgacgtat
tacagcgcattgctgaccggtcggccgcagtcgctgaaggatcggctgggcaaggtggtg
cccgaatcggtcacgccggacgacctgccataa
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