Ralstonia pickettii 12D: Rpic12D_3425
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Entry
Rpic12D_3425 CDS
T00925
Name
(GenBank) DNA topoisomerase
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpf03032
]
Rpic12D_3425
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_3425
Enzymes [BR:
rpf01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
Rpic12D_3425
DNA replication proteins [BR:
rpf03032
]
Prokaryotic type
DNA Topoisomerases
Rpic12D_3425
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
Rpic12D_3425
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ACS64689
UniProt:
C6BIL6
LinkDB
All DBs
Position
1:complement(3620283..3621461)
Genome browser
AA seq
392 aa
AA seq
DB search
MLRREQPAGGRCEKGTPLAQREHLSRPSTVERVPKSAPALVAATATLLAEALPEQLRYVD
DTRPGYTRRRLRGQFAYFDTRGQRIRDPAIIARINKLAIPPAYTDVWICPHVGGHLQATG
RDARGRKQYRYHAEWRAFRDADKYGRLLAFGAVLPRVREAITAHLEAPGLSREKMLATVV
YLLDVTLVRVGNAAYARDNRSYGLTTLRNRHVEVHGNTVRFQFRGKSGVEHDVSVSDPRL
ARIIRRCVDLPGQELFQYIDEAGDRRVVDSTDVNAYLQEIGGADFTAKDYRTWAGSVLAL
DLLRGRTSTNVTEARRQVVEAVAAVAQRLGNTPAVCRKCYVHPAVVDAFLAGELEALPPT
RARKGLRREEVALLYFLEHIASTKGTGEKKPA
NT seq
1179 nt
NT seq
+upstream
nt +downstream
nt
atgctacgccgcgagcaacccgccggcggcaggtgtgagaaaggaacgccgcttgctcaa
cgcgagcatctctccaggccctctaccgtggaacgcgttcccaagtctgcgcccgcgctg
gttgctgcaaccgccaccctcctcgccgaagcgctgcccgaacagctgcgctatgtggac
gacacacgcccgggctacacccggcgccggctacgcggccaattcgcctatttcgacacg
cgcggccagcgcatccgcgacccggccatcattgcccgcatcaacaagctggcgatcccg
ccggcctataccgacgtctggatctgcccacatgtgggcgggcatctgcaggcaacgggg
cgggacgcgcgtgggcgcaagcaatatcgctaccacgcagaatggcgcgcctttcgcgat
gccgataaatacgggcggctgctggccttcggggcagtgctgccgcgggtgcgcgaagcg
atcaccgcccatttggaggcgccgggcctgtcgcgcgagaagatgctggcgacggtggtc
tacctgctggacgtgacgctggtgcgcgtgggcaacgccgcgtatgcgcgcgacaaccgc
tcctatgggctcacgacactgcgcaaccgccacgttgaggtgcacggcaatacggtgcgc
tttcagtttcgtggcaaaagcggcgtggagcacgacgtgtcggtatcggatccgcgcctg
gcgcgcattatccggcggtgcgttgatctgccgggacaggaattgttccagtacatcgac
gaagctggcgaccgccgagtagtcgattccacggatgtgaacgcatacttacaagagatt
ggcggcgcggatttcacggcgaaggactaccgcacctgggccggcagcgtgctggcgctg
gatctgctgcgcgggcgcacgtcgacgaacgttaccgaggcgcgccggcaggtggtggag
gctgttgctgccgtggcccagcgcctcgggaacacgccggccgtctgccgcaaatgctat
gtgcacccggctgtggtggacgcgttcctggcgggcgaactggaagcgctgcccccgacc
cgcgcgcgcaagggtctgcgacgcgaagaagtggccttgctttactttctcgagcacatc
gccagcactaagggcacaggcgaaaaaaagcccgcctga
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