Ralstonia pickettii 12D: Rpic12D_3564
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Entry
Rpic12D_3564 CDS
T00925
Name
(GenBank) sigma54 specific transcriptional regulator, Fis family
Organism
rpf
Ralstonia pickettii 12D
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GFIT
Motif
Pfam:
Sigma54_activat
XylR_N
AAA_lid_14
Sigma54_activ_2
V4R
HTH_8
AAA_5
Mg_chelatase
AAA_16
AAA_2
AAA
HTH_1
TsaE
nSTAND3
IstB_IS21
Motif
Other DBs
NCBI-ProteinID:
ACS64824
UniProt:
C6BL66
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Position
2:108420..110114
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AA seq
564 aa
AA seq
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MEAKLNYPSDADLRRLLRFDPESGTIWLGERRMLLLHTAALSGLRQDLINSVGPVHARRL
LTRMGYASGRRDAEFARKTRGALSLDAAFMVGPQLHMLEGAVRVTPIQLDFDPASGRFHG
EFRWDNSWEAHAHRQAFGLVDEPACWIQLGYASGYTSAFMGRLILFKETHCAACGADHCE
IVGKPIDEWPDGDEQRQYFEDESLLDTIAALNEQVQALKTTIESTCEPNVAAGMLVGRSP
AFQRAHELLNRAAATQVTVLLTGETGVGKERFARALHQGSARAAGPFVAVNCAALPADLI
EAELFGVERGAYTGAHAARSGRFERADGGTLFLDEVGDLPLPAQAKLLRVLQEGEIERLG
AETTRKVNVRLVAATNVDLEAAVAQGRFRRDLLYRLNVYPICIPPLRERTTDIEPLANHL
LARFTALHQKRLAGFGERAMQALVHHDWPGNVRELENLVERGVILAPQGENIEIEHLFPN
QPTGVQSQLSAQGRLAPVRLESEQALCTRILDSGLSLEALETQLLDLAVERAKGNLSGAA
RQLGLTRPQLAYRLKRHLDRGSEE
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
gtggaagccaagctcaactacccctcggacgccgacctgcggcgcctgctgcgtttcgac
cccgagagcggcaccatctggctgggcgagcgacgcatgctgttgctgcataccgccgcg
ctgagcggtctgcggcaggacctgatcaactcggtgggcccggtccatgcgcgccgcttg
ctgacccgcatgggctacgcctctggccgccgcgacgccgaattcgcacgcaagacccgc
ggcgcgctctcactcgatgccgccttcatggtcggcccgcagttgcacatgctcgaaggg
gcggtgcgtgtcacgcccatacaactggacttcgacccggcgagcggacgcttccatggc
gagttccgctgggacaactcatgggaagcacacgcccaccgccaggcatttggccttgta
gacgaacctgcctgctggatccagctcggctatgccagtggctataccagcgcgttcatg
ggccgcctcatcctcttcaaggaaacccactgtgctgcctgcggcgccgatcactgcgag
atcgtcggcaagccgatcgacgaatggcccgacggcgacgaacaacggcagtactttgaa
gatgagtctctgctcgacacgattgcagcgctcaacgaacaggtgcaggcgctcaagacc
acgatcgaatcgacctgcgagcccaatgtggccgccggcatgctggtcggccggtcgccc
gcgttccagcgcgcccacgaactgctcaaccgtgcggccgccacgcaggtcacggtgctg
ctcaccggcgagaccggcgtgggcaaggagcgctttgcgcgcgccctgcatcaggggtcg
gcccgcgcggccggccccttcgtggccgtcaactgcgcggcgctgcccgccgacctgatc
gaagccgagctgtttggcgtcgaacgcggcgcctacacgggcgcccatgcggcgcgcagc
ggccgcttcgagcgggcggatggcggcacgctctttctcgatgaagtgggcgacctgccg
ctgcccgctcaggccaagttgctacgcgtgctgcaagaaggggaaatcgaacgcctgggc
gcggaaaccacgcgcaaggtcaacgtgcgtcttgtggccgccaccaacgtcgacctggaa
gccgcggtggcccaggggcggtttcgtcgggacctgctgtatcggctgaacgtctatccg
atctgcattccgccgctgcgtgaacgcacgaccgatatcgagccgctggccaatcacctg
ctggcccgattcacggccttgcaccagaagcgcctggcaggctttggcgagcgcgccatg
caggcgctcgtgcaccacgactggcccggcaacgtgcgcgagctggagaacctggtggag
cgcggcgtcatcctcgccccgcagggcgagaacatcgagatcgaacacctctttccgaac
cagcccacgggtgtgcaatcccagttgagcgcgcagggccgtctggcgccggtgcgcctg
gaaagcgagcaggcgctgtgcacacgcatcctggacagcggcctgagcctggaagcgctg
gaaacgcaattgctcgacctggccgtcgagcgtgccaagggcaacctttccggcgccgca
cgccagcttggcctgacccggccgcaactggcctaccgcctcaagcgccatctagacagg
ggcagcgaagaatga
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