Ralstonia pickettii 12D: Rpic12D_3566
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Entry
Rpic12D_3566 CDS
T00925
Name
(GenBank) formate dehydrogenase, alpha subunit
KO
K00123
formate dehydrogenase major subunit [EC:
1.17.1.9
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00630
Glyoxylate and dicarboxylate metabolism
rpf00680
Methane metabolism
rpf01100
Metabolic pathways
rpf01120
Microbial metabolism in diverse environments
rpf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
Rpic12D_3566
09102 Energy metabolism
00680 Methane metabolism
Rpic12D_3566
Enzymes [BR:
rpf01000
]
1. Oxidoreductases
1.17 Acting on CH or CH2 groups
1.17.1 With NAD+ or NADP+ as acceptor
1.17.1.9 formate dehydrogenase
Rpic12D_3566
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Gene cluster
GFIT
Motif
Pfam:
Molybdopterin
Molydop_binding
Fer2_4
Molybdop_Fe4S4
Fer4_Nqo3
Fer4_7
Fer4_9
Fer2
Fer4_10
Motif
Other DBs
NCBI-ProteinID:
ACS64826
UniProt:
C6BL68
LinkDB
All DBs
Position
2:complement(110945..113605)
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AA seq
886 aa
AA seq
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MVRLTIDGAPWETAEGTLLIDALSAAGSAVPNLCHDKRLMPFGGCRLCVVHVDGYANPVA
SCTTEVAEGMSVQTDSSTLQALCRTNLELIAARYPRSAYAADPRHPFHRLLTDYGVPPGG
KREDGLFRDDSHPYLGVSMDRCVYCQRCVRICEEVQGQFIWEAIGRNDASRIAVGRGPTL
REAGCVSCGACVDTCASGALFDKRQVSRPTAWTRTTCAYCGVGCQMDVGVANGRVVTVRP
ADRPVNRGHLCVKGRYAFEYNHAPDRVTQPMLRRDGRWQPVGWGEALDFAATQLQAIVMR
HGPDAVGVLASSRATNEENYLAQKFARVVLGTHNIDCCARVCHTPSARALQTMLGIGAAT
NSFDDIERASAFLVCGANPTENHPVVGARIKQAVLKGARLVVIDPRRTELAALADVHLPV
RTGCNVPLFNALAAAMIEEGWVDRAFLAERVDGFEAFAAHVAAFSPERVADLCGVPAAAI
RAAARIYAQSRPAMCFHGLGVTEHLQGSEGVMALVNLALLTGNLGKPGAGINPLRGQNNV
QGAAQMGCDPSVLTGAQSIAQAGARFEQAWGTRLPATRGLDVLEMMDAAQAGRLKALWVM
GYDIYLSLANANATAAALAALDLVIVQDLFVNQTAEAFGTVFLPAASSFEKDGTFMNSDR
RVQRVRAATTAPGQARPDWWIIQALAARMGKPKGFAFEGPQQIWDEVRALWPDGAGLTYA
RLEHEDLHWPCLDQSHPGTAVLHRDAFVGSKTATLVPVPYVPTPEQTDDAYPLLLTTGRV
LDQFNAGTMSCRTPNAALRPSDTLDMAPVDAARLGLVEGEMVRVSSRHGSAALPLHITDA
MQAGQLFCSFHRPDLRINALTSPVRDWLVHAPEFKVTAVRVEKVAG
NT seq
2661 nt
NT seq
+upstream
nt +downstream
nt
atggtccgattgacgatcgacggggcgccatgggagacggctgaaggcacgttgctgatc
gacgcgctgtcggcagccggcagcgcggtaccaaacctgtgccatgacaagcgcctgatg
ccgttcggtggatgccgtctctgcgttgtacacgtggatggctacgcgaaccccgttgca
agctgtaccaccgaagtggcggaaggcatgtccgtccagacggacagcagcacactgcag
gcgctgtgccgcacgaatctcgaactgattgctgcccgctatccgaggtcggcatacgcg
gcagacccgcgtcacccgtttcaccgattgctgaccgactacggcgtaccgccgggcggc
aagcgcgaagacgggctgttccgggatgacagtcacccttacctgggcgtcagcatggac
cgctgcgtctactgccagcgctgcgtgcgcatttgcgaagaggtgcaggggcagttcatc
tgggaggcgatcggccgtaacgatgcctcccgcattgcggttggccgaggcccgacgctg
cgcgaggcaggctgcgtgagttgcggcgcctgcgtggacacctgcgcgagcggcgccctg
ttcgacaagcgtcaggtctccaggcccaccgcctggacgcgcacaacctgcgcgtattgc
ggcgtgggttgccagatggatgtcggcgtggccaacggccgggtggtgacggtgcgcccc
gccgatcgtccggtcaatcgcggacatctatgcgtcaaggggcgctatgcattcgagtac
aaccacgccccggatcgcgtgacccaaccgatgctgcggcgggatgggcggtggcagccc
gtgggatggggcgaggcgctcgactttgcggcaacacaattgcaggccatcgtcatgcgt
catgggcccgatgcggtcggtgtgctggcgtcgtcgcgcgccaccaacgaagagaactac
ctggcgcagaagtttgcccgcgtggtgctcggcacgcataacatcgactgctgcgcccgg
gtgtgccacacgcccagcgccagggcactccagacgatgctcggtatcggcgcggccacc
aacagcttcgacgacatcgagcgcgcgagcgcttttctggtctgcggagcgaacccgacc
gagaaccaccccgtggtcggcgcacgcatcaagcaggccgtgctcaaaggggcgcgcctg
gtggtgatcgatccgcgccgcaccgagctggccgcgctggccgatgtccatctgccggtg
cgcacgggctgtaacgtgccgctgttcaatgcattggccgcggccatgatcgaggaaggc
tgggtggaccgcgcattcctcgccgaacgcgtcgatggcttcgaggcgtttgccgcgcac
gtcgccgcgttttcaccggagcgcgtggctgacctctgcggcgtgccggcggcggcgatc
cgcgcagccgcgcgaatctatgcgcagagccggccagccatgtgctttcatggcctgggg
gtgaccgagcatctgcagggcagcgaaggggtgatggcgctcgtcaacctcgccctgctc
acgggcaacctcggcaagccgggcgctggtatcaacccgctgcgtggccagaacaacgta
caaggcgcggcacagatggggtgcgacccttccgtgctgaccggtgcgcagtccatcgcg
caggctggtgcgcgtttcgagcaggcatgggggacccggctgcccgcaacgcgcggcctg
gacgtactcgaaatgatggatgcggctcaggcagggcgcctgaaggccttgtgggtcatg
ggctacgacatctatctgtcgctggccaacgcgaacgccacggccgccgcgcttgccgcg
ctagacctggtgatcgtgcaggacttgttcgtcaaccagaccgccgaggccttcggtacg
gtgttcctgcccgcggcgtcttcattcgagaaagacggcaccttcatgaactcggaccgg
cgcgtgcagcgcgtccgtgcggccacgacggcccccgggcaggcacgtcccgactggtgg
atcatccaggcgcttgccgcgcgcatgggcaagcccaaggggttcgcgttcgaggggccg
cagcagatctgggatgaagttcgcgcgctgtggcctgatggcgctggcctgacgtatgcg
cgtctggagcacgaagacctgcactggccatgccttgaccaaagtcaccccgggacagcc
gtgctgcaccgggacgcgtttgtcggcagcaagacggccacgttggtgccggtgccctat
gtgccgaccccggagcaaaccgacgatgcctacccgctgctgttgacgacgggccgcgtg
ctcgatcaattcaatgcgggcacgatgagttgccgcacgcccaacgcagcgctgcggccg
tcggacacgctggatatggcgccggtcgacgcggcacgccttgggctcgtcgaaggcgag
atggtgcgcgtctccagccgtcatggttctgcggcgctgccgctgcatatcaccgacgcc
atgcaggccggccagctcttctgcagctttcaccggcccgacctgaggatcaacgcattg
acatcgcccgtgcgagactggctggtgcacgctccggaattcaaggtgaccgcggtgcgg
gtcgagaaggtggcgggttga
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