Ralstonia pickettii 12D: Rpic12D_3579
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Entry
Rpic12D_3579 CDS
T00925
Name
(GenBank) transcriptional regulator, NifA subfamily, Fis Family
KO
K12266
anaerobic nitric oxide reductase transcription regulator
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpf03000
]
Rpic12D_3579
Transcription factors [BR:
rpf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rpic12D_3579
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
Sigma54_activ_2
AAA_5
Mg_chelatase
AAA_2
AAA_16
HTH_8
GAF
GAF_2
AAA_22
HTH_50
HTH_AraC
Motif
Other DBs
NCBI-ProteinID:
ACS64839
UniProt:
C6BL81
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All DBs
Position
2:127731..129266
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AA seq
511 aa
AA seq
DB search
MIDRLLLTDLVADLPPAVRMQRLVGSLRTHFRCGAVALLKLEEDHLRPVAVDGLVRDALG
RRFVVGQHPRLAAILARHGVTCFHHDSTLPDPYDGLIDEQAGVPLPVHDCMGLGLQVEGR
PWGVLTLDALKVGTFDADAQAELGRLAVVVEAAARTTRLEAEIRALRATRADSPAGDATT
DASEIVGQSPAIHQLLHELEVVADSELPILVLGETGVGKELFVHRLHRLSRRRDRPLVHV
NCAALPESLAESELFGHVKGAFSGATGERPGRFEAADGGTLFLDEVGELPLTVQAKLLRA
LQNGEIQRLGADRPRHVDVRVIAATNRNLRERVRDGAFRADLYHRLSVYPVPIPPLRERG
NDILLLAGRFLEHNRARLGLRSLRLSPDAERALRSYPWPGNVRELEHVISRAALKVLSRG
ARRDDIVTLGAELLDLDTEVASPDTSSPDVPQDVRPGTPLRDAVADFQRRCIESALATHD
DNWARAARALGLDASNLHKLARRLGLKPADG
NT seq
1536 nt
NT seq
+upstream
nt +downstream
nt
atgattgatcgcctgctcttgaccgacctggttgccgatctgccgcccgctgtccgcatg
cagcgactggtgggcagcctgcgcacgcactttcgctgcggggccgtagcgttgctgaaa
ctcgaggaagaccacctgcggccggtggccgtggatggcctggtgcgcgatgcgctgggc
cggcgcttcgtggtcggacagcacccgcggctggccgccatcctggcgcgacatggcgtg
acatgcttccaccacgacagcaccctgcccgatccatacgacgggctcattgacgaacag
gcaggcgtgccattgccggtgcacgactgcatgggtctcggcttgcaggtggagggccgg
ccctggggcgtgctgacgctggacgcgctcaaggttggcacgtttgacgcggatgcgcag
gccgaactgggccgcctggctgtcgtggtggaagcggccgcgcgcaccacgcggctcgag
gcggagatccgtgcgctgcgtgccacgcgcgctgattcgcccgccggcgacgccaccacc
gacgcaagcgaaatcgttggccagagccctgccatccaccagttgctgcacgagctggaa
gtggtggccgattctgaactgccgatcctcgtgctgggcgaaaccggcgtcggcaaggag
ctgtttgtccaccgtctgcatcgcctgtcgcgccggcgcgatcgtccgctggtgcatgtc
aattgcgcggcgctgccggagtcgctggcagagagcgaactgtttggccatgtcaaaggc
gccttctcgggcgccacgggagagcgccccggtcgctttgaggcggcggacggcggcacc
ctgttcctggacgaggtcggtgaactgccgctcacggtgcaggcgaagctgctgcgcgcc
ctgcagaacggcgagatccagcggctcggcgccgaccgcccccgccacgtcgacgtacgg
gtcattgcagcgaccaaccgcaacctgcgcgagcgcgtgcgcgatggcgcgttccgggcc
gacctctatcaccggctgtcggtgtatccggtgccgattccgccgctgcgcgaacgcggt
aacgacatcctgctgctcgctggccggtttctggagcacaaccgggcgcgtctcggcttg
cgcagcctgaggctcagcccggatgccgagcgcgccctgcgcagctatccatggcccgga
aacgtgcgcgagctggaacacgtgatcagccgcgccgcgctcaaggtactgagccggggc
gcgcgccgcgatgacatcgtgacgctgggtgccgagctgctcgacctcgacacggaggtc
gcctcacccgacacgtcatcgcccgacgtgccgcaggatgtccgccccggcacgcccctg
cgcgacgccgttgccgactttcagcgacgctgcatcgaatcggcattggccacgcacgat
gacaactgggcgcgggcggcgcgggccctcgggctggatgcaagcaacctgcacaaactg
gcaagacgcctggggctgaaaccggcggacggttga
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