Ralstonia pickettii 12D: Rpic12D_3976
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Entry
Rpic12D_3976 CDS
T00925
Name
(GenBank) proprionate catabolism activator, Fis family
KO
K02688
transcriptional regulator, propionate catabolism operon regulatory protein
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
rpf03000
]
Rpic12D_3976
Transcription factors [BR:
rpf03000
]
Prokaryotic type
Helix-turn-helix
Other families
Rpic12D_3976
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma54_activat
PrpR_N
Sigma54_activ_2
HTH_8
AAA_5
PAS
Mg_chelatase
PAS_4
PAS_8
AAA_2
AAA_7
AAA_16
TIP49
AAA
Diguanyl_cycl_sensor
HTH_23
HTH_Tnp_ISL3
PAS_7
DUF6262
Motif
Other DBs
NCBI-ProteinID:
ACS65232
UniProt:
C6BMC4
LinkDB
All DBs
Position
2:557911..559857
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AA seq
648 aa
AA seq
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MSPTAPDLTDRPRIWACGISRLSDLFLDIAAEYNDRAELRVITRGFEDIVREIDAAGAER
PDVVVAGGSNGAYLKPRLSLPVVVINPTGFDVMHALARARRDAESVALVTHGDTPEEVRR
FVAAYGMDVVFASYTSRQGAESCVLDLRDRGVGVVVGPGLVTDLATQAGMNAVFLYSRDS
VRAAFDTALEVVQATRRETLRRQRLDNLLQHLRDGVVALDAQGRVEAINQRLATALGIEA
KQAIGQPLLSIAPNLLGLLPDTDGDTLGTVQGVNYVIHRGPLTSTGTGAAEGTVFTFQES
RAVERLDRTLRSRQRPQQFSARYRLEDLVGESLAMERVRTLIRRYAKSDATVLVLGESGT
GKEMVAQGMHQLSARRDFPFVAINCGAFPEALLESELFGYEEGAFTGARKGGKTGLIEAA
HRGTLFLDEIGEMPLPLQSRLLRVLQEREVVRLGSTEPTRVDIRVVAATHRALTDAVQAG
TFRADLYYRLNILSIALPPLRERPDDVMPLAVELLVQAARRDPRLLLRIADTEEAARVLA
GVAEPLRRYAWAGNVRELQSVVERIAVELAYTEDASAITQDVLRLIAPEVFAHATPGKPA
VLTLRERSRGVEAEEIRAALAAHGGDRDAVCAALGISKTTLWRRLQMG
NT seq
1947 nt
NT seq
+upstream
nt +downstream
nt
atgagccccactgcacccgacctgaccgaccgcccccgcatctgggcttgcggcatcagc
cgcctgagcgatctcttcctcgatattgccgccgagtacaacgaccgcgccgagctgcgc
gtcatcacacgcggctttgaagacatcgtgcgcgagatcgacgccgctggcgccgagcgg
cccgacgtggtggtggcgggcggctccaacggcgcctacctgaagccgcgtctgtcgctg
ccggtggtcgtcatcaacccgacgggctttgacgtgatgcatgcgctggcccgcgcccgg
cgcgacgcggaatcggtggcgctcgtcacccacggcgacacgcccgaggaggtgcgccgc
tttgtcgccgcctatggcatggacgtggtgtttgcctcgtacacctcgcgccagggcgcg
gagagttgcgtgctggacctgcgcgaccgcggcgtgggtgtggtggttggccccggtctg
gtgacggacctggcaacgcaggcgggcatgaacgccgtgttcctgtattcgcgggactct
gtgcgtgcggcattcgataccgcgctggaagtcgtacaggccacgcgccgcgaaaccctg
cgccgccagcggttggacaacctgctgcagcatctgcgtgacggtgtggtcgcgctggat
gcgcagggtcgcgtggaggccatcaaccagcggctggccacggcgttgggcatcgaggcc
aagcaggccatcgggcaaccgctgctcagcattgcgcccaacctgctcggcttgctgccc
gataccgacggcgacacgctgggcaccgtgcagggcgtgaactacgtcatccaccgtggc
ccgctcacgagcaccggcaccggcgccgcagaaggcacggtgttcaccttccaggaatcc
cgcgcggtggagcggctggaccgcacgctgcgctcacgccagcgcccgcagcagttcagc
gcgcgctatcggctcgaagacctggtgggcgaatcgctggcgatggaacgcgtgcgtacg
ctgatacgccgctatgccaaatccgacgccaccgtgctcgtgctgggcgaatccggcacg
ggcaaggagatggtcgcgcaggggatgcatcagctcagcgcgcggcgcgattttccattc
gtcgccatcaactgcggcgcgtttcccgaagcgctgctggaaagcgaactgttcggctac
gaagagggcgccttcaccggcgcgcgcaagggcggcaagacggggctgattgaagccgcg
caccgcggcacactgtttctcgatgaaatcggcgagatgccgctgccgctgcaaagccgc
ctgctgcgcgtattgcaggagcgcgaggtggtgcggctgggttccaccgagcccacccgc
gtcgatattcgcgtggtggccgccacgcatcgcgcgctgacggacgccgtgcaagccggc
accttccgcgcggacctgtactaccgcctcaatatcctcagcatcgcgctgcccccactt
cgcgaacgccccgacgacgtgatgcccctggccgttgaactgctcgtgcaggccgcgcgc
cgcgatccgcgcctgctgctgcgcattgccgacacggaagaggctgcccgcgtgctggcc
ggtgttgccgagccgctgaggcgctacgcctgggccggcaatgtgcgcgaactgcagagc
gtggtcgagcggattgccgttgaactggcttacaccgaagacgccagcgccatcacgcaa
gacgtgctgcggctgattgcacccgaagtgtttgcccacgccacaccgggcaaaccggcg
gtattgacgctgcgcgagcgcagccggggcgtggaagcggaagagatacgcgcagcgctg
gccgcccacggcggcgatcgggatgccgtatgtgccgcgttggggatcagcaagacgacg
ttgtggcggcggctgcagatgggctag
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