Ralstonia pickettii 12D: Rpic12D_4063
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Entry
Rpic12D_4063 CDS
T00925
Name
(GenBank) diguanylate cyclase/phosphodiesterase with PAS/PAC sensor(s)
Organism
rpf
Ralstonia pickettii 12D
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_3
PAS_9
PAS_4
PAS
PAS_8
dCache_1
HAMP
Motif
Other DBs
NCBI-ProteinID:
ACS65312
UniProt:
C6BMK4
LinkDB
All DBs
Position
2:651454..655005
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AA seq
1183 aa
AA seq
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MPKHAFFPTTLRGRLLALAAVAALPAIVVAIAGVALYRDRLNDHLAQHLTHETETAAARV
GMVLSNANTLLSVLIADDSALRMERQECSSFVNRVFHNQSELANLGIIDAHRKLVCTPDT
AKLAIDLSDRPYINEIMATGRPSLSTFVIGRVSGQAVLISARPMAGNDGTIRGVAYAAVR
QSALIAAAVDGMSEAPVYLVDAAGNVLSTHGALEAAQVPAIVRGPLVAAAAQQPGEPVFV
DDTDGVRRAYAAMVVPHAAGGHLRIVRGVDATDIVRQQRNVTLAGGGAILLMVVMLLALI
QMALRRMVMPRIDALVDAARHYATGDFSARVPEHGSSRDELSLLERTFNEMRAAIQRHDA
TVHRLTERFQRVARATNDWIFDWDIATGESWANASLHRLLGSDALLGQGDDDGTGGGTSR
TLTFQQFVHPDDVDAFAHELRTVLNSDRDSWQHVCRVIDANRATRTVEIRASLYRDQDGR
AVRMVGGVTDISQRSAIEQELRSSEANLRVAEQIALLGSWRWDVLRDSTTWSSGMYVLTG
MPPGAPPAFAQQAQFFTADSYNRLREAASRAVTEGEAYSLELEMIRRDGEHRWVLSRGNI
ERNDRDEVVALFGTMQDITDRRESDEQLRLLRRVVESVPSGITVADAQQPDFPIVYVNPG
FERMTGYRAEEILGRNARFLHSSEPGQPALNEVRTALRDESEIRVLLRNFRKDGHAFLNN
FLLSPVRDAKGAVTHYVGIQDDVTEQEMTRTRLAQHATIDSLTGLPNRTLLADRVQQSVE
MAARQRSRFYVALVNIDRFKVVNDSLGHLLGDEVLRRVAERLRDAADTVDTVARFGGDVF
ALVISHAGSRGVDFGFDLFAEPVRVEGHEVFVTASIGVAEYPAHGADADSLIRHAEMAMY
YAKQNGRNRLEFFAPEMDIGVSYRLNLEHQIRATLEQGQFRLLYQPQIDTKTGRVCGLEA
LIRWIHPTRGLLPPAAFIPVAEESGLIVEIGNWVLTEAARQRAEWHKRGLADDLTLAVNV
SPLQFKRGTVLPTLLKLQRQYGLGSGFLELEVTESMLMEGTERTIEDLTAIRQLGVRIAI
DDFGTGYSSLAYLKRLPIDLIKIDRAFVKDIDRDSNDAAICTTVVVLAHNLGVKVCAEGV
EDAAQSAFLASHQCDVLQGYYFSEPLLPEAVTALLERNTRFTL
NT seq
3552 nt
NT seq
+upstream
nt +downstream
nt
gtgccgaagcacgctttctttcccaccacgctgcgcggccgcttgcttgccctggccgcg
gtggccgccttgccggccattgttgtcgcgattgctggtgtggcgctttatcgtgaccgg
ctcaatgatcaccttgcccagcacctgacccacgaaaccgagactgccgctgcgcgcgtc
ggcatggtgctgtccaacgccaatacgctgctctcggtgctcatcgcggacgattcggcg
ctgcgcatggagcggcaagagtgcagcagtttcgtcaaccgcgtctttcataaccagagc
gaactcgcgaacctcggcatcatcgacgcgcatcgcaagctggtatgtacgcccgatacg
gcgaagcttgccatcgatctgtcggaccgaccgtacatcaacgagatcatggcgacgggc
cgaccgtccctgtcgacatttgtgatcggacgcgtctccggccaggcagtgttgatttcg
gcgcggccgatggcaggcaacgacggcaccatccggggcgtggcgtacgcggccgtgcgg
cagagcgcgttgattgcggcggccgtcgacggcatgtcggaggcgccggtctacctcgta
gatgcggcgggcaacgtgttgtcgacccacggtgctctggaggccgcccaggtgccggcc
attgtgcgcgggccgctggtggccgctgcggcccagcagccaggcgaaccggtgttcgtg
gacgacaccgacggcgttcgccgcgcctacgccgccatggtggtgccgcacgcggccggc
gggcatttgcgcatcgtgcgcggcgtggacgctaccgacatcgttcgccagcagcgcaac
gtgacgctggccggcggcggcgccatcctgctgatggtggtgatgctgctggcgctcata
cagatggcgctgcggcggatggtcatgccgcgcattgatgcgctggtggatgcggcccgc
cactacgcaacgggcgatttttccgcccgcgtgcccgagcacggctcctcgcgcgatgaa
ctctcgctgcttgagcgcaccttcaacgaaatgcgtgccgccatccagcgccacgacgcc
accgtccaccgcctgaccgaacgcttccagcgcgtggcgcgcgccaccaacgactggatc
ttcgattgggatatcgccaccggcgagtcctgggccaacgccagcctgcatcggctgctt
ggcagcgacgcgttgctgggccagggcgacgacgacggtacaggtggaggtacctcgcgc
acgctgacattccaacagttcgtgcacccggacgacgtcgacgccttcgcgcacgagctg
cgcactgtattgaattcggaccgcgacagctggcagcacgtctgccgggtgatcgatgcc
aaccgtgccacgcgcacggtggagattcgcgcaagcctttatcgtgatcaggacggccgc
gccgtgcgcatggtcggcggggtgaccgacatttcgcagcgctcggcaatcgagcaggaa
ctgcgcagcagcgaagcgaacctgcgtgtggcggaacagattgcgctcctgggcagttgg
cgctgggacgtgctgcgcgactcgaccacgtggtcgtcgggcatgtacgtgttgactggc
atgccgccgggtgcgccgccggcctttgcgcagcaggcgcagttctttaccgctgacagt
tataaccgtctgcgcgaagccgccagccgtgccgtgaccgaaggtgaggcgtactcgctg
gagctggagatgatccgccgcgacggcgagcaccgctgggtgctttcgcgcggcaacatc
gagcgcaacgatcgcgatgaggtcgtcgccttgttcggcaccatgcaggacatcacagat
cggcgcgaatcggacgagcaactgcggttgctgcgccgcgtggtcgaatcggtgccgtcc
ggcattactgtggccgacgcacagcagcccgactttccgatcgtgtacgtgaaccccggc
ttcgagcgcatgacgggctatcgcgcagaggaaattctgggccgcaacgcgcgcttcctg
cattcgtccgagcctgggcagccggcgctgaacgaagtgcgaaccgcgctgcgcgacgag
agtgagatccgcgtgctgctgcgcaatttccgcaaggacggccacgccttcctgaataac
ttcctgctctcgcccgtgcgtgatgccaagggtgcggtcacgcattacgtcggcattcag
gacgacgtgaccgagcaggagatgacgcgcacgcgcctggcgcagcacgccaccatcgat
tcgctcacgggcctgcccaaccgcacgctgctggctgaccgcgtgcagcagtcggtggag
atggccgcacgccagcgtagccgcttctatgtggcgctcgtcaacattgaccgtttcaag
gttgtcaacgacagccttggccacctgctgggcgacgaggtgctgcgtcgtgtggccgag
cgcctgcgcgatgcggccgatacagtggacaccgtggcgcgttttggcggcgacgtgttt
gcactggtgatctcgcacgcgggttcgcgcggtgtcgatttcggctttgacctgtttgcc
gaaccggtgcgcgtggaagggcacgaggtgttcgtgacggcgagtattggcgtggccgaa
tacccggcgcacggcgcagacgccgatagcctcatccgccacgccgagatggcgatgtac
tacgccaagcagaacggccgcaatcggctggaatttttcgcgccggagatggacatcggc
gtgtcgtaccggctgaacctggagcaccagattcgtgctacgctggagcaggggcagttc
cgcttgctgtaccagccgcagatcgacaccaagaccggccgcgtgtgcgggctggaagcg
ctgatccgctggattcatccgacacgcgggttgctgccgccggccgcgttcattccggtg
gccgaagagagcgggctgattgtcgagatcggcaactgggtcttgaccgaggccgcgcgg
cagcgcgccgagtggcacaaacgcggcctggccgatgacctgacactggctgtgaacgtg
tcgccgctgcagttcaagcgcggcaccgtgctgccgacgctgctcaagctgcagcgccaa
tatggcctgggctccggcttccttgaactggaagtgaccgagtcgatgctgatggaaggc
accgagcgcaccatcgaagacctcacggccattcgacagcttggcgtgcgcattgccatc
gacgacttcggcacggggtattcgagcctggcgtatctgaagcgcttgccgatcgacctc
atcaagatcgaccgcgcgttcgtcaaggacatcgatcgagattccaacgatgccgcgatc
tgcaccaccgtcgtggtgctggcccacaaccttggcgtgaaggtgtgcgccgaaggtgtg
gaagacgctgcgcagtcggcctttctggcctcgcaccaatgcgacgtgctgcagggctat
tacttcagcgagccgctgttgcccgaggcggtgacggcattgctggagcgcaacacgcgc
ttcacgctgtaa
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