Ralstonia pickettii 12D: Rpic12D_4087
Help
Entry
Rpic12D_4087 CDS
T00925
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00010
Glycolysis / Gluconeogenesis
rpf00620
Pyruvate metabolism
rpf00630
Glyoxylate and dicarboxylate metabolism
rpf00640
Propanoate metabolism
rpf00680
Methane metabolism
rpf00720
Other carbon fixation pathways
rpf01100
Metabolic pathways
rpf01110
Biosynthesis of secondary metabolites
rpf01120
Microbial metabolism in diverse environments
rpf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rpic12D_4087
00620 Pyruvate metabolism
Rpic12D_4087
00630 Glyoxylate and dicarboxylate metabolism
Rpic12D_4087
00640 Propanoate metabolism
Rpic12D_4087
09102 Energy metabolism
00720 Other carbon fixation pathways
Rpic12D_4087
00680 Methane metabolism
Rpic12D_4087
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpf01004
]
Rpic12D_4087
Enzymes [BR:
rpf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
Rpic12D_4087
Lipid biosynthesis proteins [BR:
rpf01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
Rpic12D_4087
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PsiB
Motif
Other DBs
NCBI-ProteinID:
ACS65336
UniProt:
C6BMM8
LinkDB
All DBs
Position
2:680986..682680
Genome browser
AA seq
564 aa
AA seq
DB search
MNEAVSAAQGFVEARDFLLRHRTDYDRAYREFAWPKLDTFNWALDYFDVMARGNDNPALW
IVDDAQGEGLKLSFAQMSERSSCMANFLRGLGMVRGDRLLLMLPNRVELWDVMLAAMKLG
AVVLPATTQLSPDDVRDRVELGGATCVVVDAAELHKFESVDASVKRIAVGAQRDGWIDLA
AAYDAPAEFVPDGPTKATDPLLLYFTSGTTSKPKLVEHTHQSYPVGHLSTMYWIGLQPGD
IHWNISSPGWAKHAWSCFFAPWNAQACVFVYNYARFVPKDTLDVLVRFNVTTLCAPPTVW
RMLVQEPLATYAVKLREIVGAGEPLNPEIIERVRSAWGVTIRDGFGQTETTCQIGNTPGQ
PVVPGSVGRPLPGYRVELVDHDDQPASEGEIVLPLSHRPLGLMQGYANNAKATAEAMRNG
YYHTSDVAMRRDDGYFVYVGRTDDVFKSSDYRLSPFELESVLIEHEAIAEAAVVPSSDPL
RLSVPKAFVTVRQGYEAGPELARAVFLFSREKLAPYKRIRRLQFSELPKTISGKIRRVEL
RRLELERTPQPARLPGEYWEEDFA
NT seq
1695 nt
NT seq
+upstream
nt +downstream
nt
atgaacgaagcggtatctgcagcacagggttttgtggaagcgcgcgattttctgctgcgc
catcgcaccgactacgaccgcgcgtatcgcgagttcgcgtggccgaagctggacacgttc
aactgggcgctcgactacttcgatgtgatggcgcgcggcaacgataacccggcgctgtgg
atcgtcgatgacgcgcagggcgaagggttgaagctgtcgtttgcgcagatgtcggagcgc
tcgtcgtgcatggcgaacttcctgcgcgggcttggcatggtgcgtggtgaccgtctgctg
ctgatgctgccgaaccgcgtcgaactgtgggacgtgatgctcgcggcgatgaagctcggt
gcggtggtgctgccggctacgacgcagctttcgccggatgacgtgcgcgaccgcgttgaa
ctgggcggcgcgacatgcgtggttgttgatgcggcagagttgcacaaattcgagagtgtt
gatgcgagtgtcaagcgcatcgccgtgggcgcgcagcgcgatggctggatcgacctggca
gcggcttacgacgcgcccgcggagttcgtgcccgacggcccgaccaaggcgaccgacccg
ctgctgctgtacttcacctcgggcaccacgtccaagccgaagctcgtcgaacacacgcac
cagagctatccggtcggacacctgtcgaccatgtactggatcggcctgcaacccggcgac
atccactggaacatcagctcacccggctgggcgaaacacgcgtggagttgcttctttgcc
ccgtggaacgcgcaggcctgcgtcttcgtttacaactacgcgcgcttcgtgccgaaggac
acgctggacgtgctggtgcgctttaacgtgaccacgctgtgcgcgccgcccaccgtgtgg
cgcatgctggtgcaggagccgctggccacctacgccgtcaagctgcgcgagatcgtcggt
gcgggcgagccgctgaaccccgagatcatcgagcgcgtgcgcagcgcctggggcgtgacc
attcgcgacggctttggccagaccgagaccacctgccagatcggcaacacgccgggccag
ccggtcgtgccgggctcggtcgggcgcccgctgcccggctaccgcgtggagctggtcgac
cacgacgatcagcccgccagcgaaggcgagatcgtgctgccgctctcgcaccgcccgctc
gggttgatgcagggctatgccaacaacgccaaagccacggccgaggcgatgcgcaacggc
tattaccacacctccgacgtcgcgatgcggcgcgacgacggctacttcgtctatgtgggc
cgcaccgacgacgtgtttaagtcgtccgactaccgcctgagccccttcgagctggaaagc
gtgctgatcgagcacgaagccattgccgaggccgccgtggtgccgagttccgatccgctg
cgcctgtcggtgcccaaggcattcgtgacggtgcgccagggctatgaggctggccctgaa
ctggcccgggccgtgttcctgttctcgcgcgaaaagctggcgccctacaaacgcatccgc
cggctgcagttcagcgagctgcccaagaccatctccggaaagatccggcgcgtggaactg
cgtcggctggagcttgaacgcacgccgcaaccggctcgcctgcctggcgagtactgggaa
gaagactttgcctga
DBGET
integrated database retrieval system
