Ralstonia pickettii 12D: Rpic12D_4255
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Entry
Rpic12D_4255 CDS
T00925
Name
(GenBank) AMP-dependent synthetase and ligase
KO
K01895
acetyl-CoA synthetase [EC:
6.2.1.1
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00010
Glycolysis / Gluconeogenesis
rpf00620
Pyruvate metabolism
rpf00630
Glyoxylate and dicarboxylate metabolism
rpf00640
Propanoate metabolism
rpf00680
Methane metabolism
rpf00720
Other carbon fixation pathways
rpf01100
Metabolic pathways
rpf01110
Biosynthesis of secondary metabolites
rpf01120
Microbial metabolism in diverse environments
rpf01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00010 Glycolysis / Gluconeogenesis
Rpic12D_4255
00620 Pyruvate metabolism
Rpic12D_4255
00630 Glyoxylate and dicarboxylate metabolism
Rpic12D_4255
00640 Propanoate metabolism
Rpic12D_4255
09102 Energy metabolism
00720 Other carbon fixation pathways
Rpic12D_4255
00680 Methane metabolism
Rpic12D_4255
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
rpf01004
]
Rpic12D_4255
Enzymes [BR:
rpf01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.1 acetate---CoA ligase
Rpic12D_4255
Lipid biosynthesis proteins [BR:
rpf01004
]
Acyl-CoA ligase
Short/medium chain acyl-CoA ligase
Rpic12D_4255
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
PsiB
Motif
Other DBs
NCBI-ProteinID:
ACS65500
UniProt:
C6BN42
LinkDB
All DBs
Position
2:856878..858575
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AA seq
565 aa
AA seq
DB search
MTSLDAFLRCRDFLLAHREDYDTAVRDFAWPQLDRFNWALDYFDAMARGNDAVALWVVDD
QGNETRLSFAQMAERSARVANHLRALGVQRGDRILLMLGNVPGLWDVMLASIKIGAVIIP
ATTLLTAEDLRERIAMGEVSHVVVGGADCAKLDAVSGTFTRIAVGTDKAPAGWHRFEDAY
DASAEFTPDAPTQASDPLLLYFTSGTTSKPKLVMHTHASYPVGHLSTLYWIGLRPGDVHW
NISSPGWAKHAWSCFFAPWNAGATVFIYNYARFEPKAVLDVLCRAKVTTLCAPPTVWRML
IQEDLAAWKPALRELVGAGEPLNPEVIERVRAAWGITIRDGYGQTETTCQIGNSPGQRVQ
PGSMGRPLPGYRITLRDPDGHEAEEGEICIELNSRPTGLMEGYAGNADKTAEAMRGGVYH
TSDIAARDASGYLTYVGRADDVFKASDYRVSPFELESVLIEHPAIAEAAVVPSPDPLRLA
VPKAFLVLRAGHEAGPELARDILGFCRSRLASYKRVRRIEFADLPKTISGKIRRVELRMR
EAARSENTAGVRNLQEYWEEDFPGD
NT seq
1698 nt
NT seq
+upstream
nt +downstream
nt
atgacatcgctggacgccttcctgcggtgccgcgactttctgctcgcgcaccgtgaggat
tacgataccgctgtgcgcgattttgcatggccccagttggaccgcttcaactgggcgctg
gattatttcgacgccatggcgcgcggcaacgatgccgtcgccctctgggtggtcgacgat
cagggcaacgagacgcggctgtcgtttgcgcagatggccgagcgttcggcgcgcgtggcc
aaccacttgcgggcgcttggcgtgcagcgcggtgaccgcatcctgctcatgctcggcaac
gtgcccgggctatgggacgtgatgctcgccagcatcaagatcggcgcggtcatcatcccg
gccacgacgctgctcaccgcagaagacctgcgcgaacgcattgccatgggggaggtgagc
cacgtggtggtgggcggggcagattgcgccaagctcgacgccgtatcgggcacgttcaca
cgcattgcggtcggtacggacaaggcgccggccggctggcaccgctttgaagacgcctac
gatgcctccgccgaattcacccccgacgcgcccacgcaggcgagcgatccgttgctgctg
tatttcacgtccggcaccacgtccaaacccaaactcgtgatgcatacgcatgcgagctat
ccggtcgggcatttgtccaccctgtactggatcggcctgcgcccgggggatgtgcactgg
aacatcagctcgcccggctgggccaagcacgcgtggagctgcttcttcgcgccgtggaat
gccggcgccaccgtcttcatctacaactacgcgcgcttcgagcccaaagcagtgctggat
gtgctctgccgggccaaggtgacgacgctgtgcgcaccgcccacggtgtggcgcatgttg
atccaggaagacttggccgcgtggaagcccgccctgcgcgaactcgtgggcgcgggcgaa
ccgctcaacccggaggtgatcgaacgggtgcgcgcggcgtggggcatcaccatccgcgac
ggctacggtcagaccgaaacgacctgccagatcggcaacagcccggggcagcgcgtccag
ccaggctcgatgggtcggccgctgccgggatatcgcatcacgctgcgcgaccccgacggc
cacgaagcggaagagggcgagatctgcatcgaattgaattcacgcccgaccggcctgatg
gaaggctacgccggtaacgccgacaaaaccgccgaagccatgcgcggcggcgtgtatcac
acctctgacattgccgcgcgcgatgccagcggctacctgacctacgtgggccgcgccgat
gacgtattcaaggcatcggattaccgtgtcagcccattcgagctggagagcgtgctgatc
gaacaccctgccatcgcggaggccgccgtcgtgccgagccccgacccgctgcgccttgcc
gtgccgaaggctttcttggtactgcgtgcggggcacgaggccggcccggaactggcgcgg
gacatcctcggattttgccgcagccgattggcttcctacaaacgcgtgcgccgcatcgaa
tttgccgatctgcccaaaaccatctcgggcaagatccggcgagtcgaactgcgcatgcgt
gaagccgcgcgcagcgagaacaccgctggcgtgcgcaacctgcaggaatattgggaagag
gatttcccgggcgattga
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