Ralstonia pickettii 12D: Rpic12D_4491
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Entry
Rpic12D_4491 CDS
T00925
Name
(GenBank) succinate dehydrogenase or fumarate reductase, flavoprotein subunit
KO
K00239
succinate dehydrogenase flavoprotein subunit [EC:
1.3.5.1
]
Organism
rpf
Ralstonia pickettii 12D
Pathway
rpf00020
Citrate cycle (TCA cycle)
rpf00190
Oxidative phosphorylation
rpf00650
Butanoate metabolism
rpf01100
Metabolic pathways
rpf01110
Biosynthesis of secondary metabolites
rpf01120
Microbial metabolism in diverse environments
rpf01200
Carbon metabolism
Module
rpf_M00009
Citrate cycle (TCA cycle, Krebs cycle)
rpf_M00011
Citrate cycle, second carbon oxidation, 2-oxoglutarate => oxaloacetate
rpf_M00149
Succinate dehydrogenase, prokaryotes
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00020 Citrate cycle (TCA cycle)
Rpic12D_4491
00650 Butanoate metabolism
Rpic12D_4491
09102 Energy metabolism
00190 Oxidative phosphorylation
Rpic12D_4491
Enzymes [BR:
rpf01000
]
1. Oxidoreductases
1.3 Acting on the CH-CH group of donors
1.3.5 With a quinone or related compound as acceptor
1.3.5.1 succinate dehydrogenase
Rpic12D_4491
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_2
Succ_DH_flav_C
DAO
Pyr_redox_2
Thi4
FAD_binding_3
HI0933_like
GIDA
Pyr_redox_3
NAD_binding_7
FAD_oxidored
DUF2285
Motif
Other DBs
NCBI-ProteinID:
ACS65733
UniProt:
C6BNS5
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Position
2:1125701..1127479
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AA seq
592 aa
AA seq
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MVAVKTGLPRRKFDVVIVGAGGSGMRASLQLAEAGLSVAVLSKVFPTRSHTVAAQGGIGA
SLGNMSEDNWHYHFYDTVKGSDWLGDQDAIEFMCRQAPNVVYELEHFGMPFDRNADGTIY
QRPFGGHTSNYGEKPVQRACAAADRTGHALLHTLYQRNVKAKTHFFVEWMALDLIRDQDG
DVLGVTALEMETGEVYILEAKTTLFATGGAGRIYAASTNAFINTGDGLGMAARAGVPLED
MEFWQFHPTGVAGAGVLITEGVRGEGGILRNKDGERFMERYAPTLKDLAPRDFVSRSMDQ
EIKEGRGCGPNGDYVLLDLTHVGAETIMKRLPSIREIGLKFANVDAIKEPIPVVPTIHYQ
MGGIPTNYHGQVVVPKNGNPNEVINGFYAIGECSCVSVHGANRLGTNSLLDLVVFGRSAG
NHIIAQNLKNREHKPLPADAADRALSRLAKLDSSSSGEYAQDVANDIRRNMQSHAGVFRT
QKLMDEGVERILEVAERAGNIHLKDKSKVFNTARVEALEVANLVEVAKATMVSAAARKES
RGAHAHSDFPNRDDENWMKHSLWYSEGNRLDYKPVQLKPLSVESVPPKARTF
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atggtcgcagtcaagactgggctgccgcgccgcaaattcgacgtcgtgatcgtcggtgcg
ggcggttcgggcatgcgcgcatcgctgcagctggcagaagccggcctctccgtggccgtg
ctgtccaaggtgttccccacccgctcgcacaccgttgcggcgcagggtggtatcggtgct
tcgctgggcaacatgagcgaagacaattggcactatcacttctacgacaccgtcaagggt
tccgactggctcggcgaccaggacgcgatcgaattcatgtgccgccaggcgccgaacgtg
gtctatgaactggaacacttcggcatgccgttcgaccgcaacgccgacggcaccatctac
cagcgtccgtttggcggccatacgtcgaactacggcgagaagccggtgcaacgcgcttgc
gccgccgccgaccgtaccggtcacgcgttgctgcacacgctgtatcagcgcaacgtcaag
gccaagacccacttcttcgtcgaatggatggcgctggatctgatccgcgatcaggacggc
gacgtgctgggcgtgaccgcgctggagatggaaaccggcgaggtctacatcctcgaagcc
aagacgacgctgttcgccacgggcggtgcaggccggatctacgcggcttccaccaacgcc
ttcatcaacacgggtgacggcctgggcatggcggcacgcgcaggcgtgccgctggaagac
atggagttctggcagttccacccgactggcgtggccggcgcgggcgtgctgatcacggaa
ggcgtgcgcggcgaaggcggcatcctgcgtaacaaggatggcgagcgcttcatggagcgc
tatgccccgacgctgaaggatctggcgccgcgtgacttcgtgtcgcgctcgatggaccag
gaaatcaaggaaggccgcggctgcggtccgaacggcgactacgtgctgctcgacctgacg
cacgtcggcgccgagaccatcatgaagcgcctgccgtcgattcgcgagatcggcctgaag
ttcgccaacgtcgacgccatcaaggaaccgattcccgtggtgccgaccatccactaccag
atgggtggcattccgacgaactatcacggccaggtggtggtgccgaagaacggcaacccg
aacgaggtcatcaacggcttctacgcgatcggcgaatgctcgtgcgtgtcggtgcacggc
gccaaccgcctgggcacgaactcgctgctcgacctggtggtgttcggccgttcggcgggt
aaccacatcattgcgcagaacctgaagaaccgcgagcacaagccgctgccggccgacgcc
gccgaccgcgcgctgtcgcgcctggccaagctcgattcgtcgagctcgggcgagtacgcg
caggacgtcgccaacgacatccgccgcaacatgcagtcgcacgctggcgtgttccgtacg
cagaagctcatggatgaaggcgtcgagcgcatcctggaagtggccgagcgtgctggcaac
atccacctgaaggacaagtccaaggtgttcaacaccgcgcgcgtcgaagcgctggaagtg
gccaacctggtggaagtggcgaaggcgacgatggtgtcggctgccgcccgcaaggaatcg
cgcggcgcacacgcccacagcgacttcccgaaccgcgacgatgaaaactggatgaagcac
tcgctgtggtattccgaaggcaaccgcctggactacaagcccgtgcagttgaagccgctg
tcggtggaatcggtgccgcccaaggcgcgtacgttctaa
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