Ralstonia pickettii 12D: Rpic12D_5039
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Entry
Rpic12D_5039 CDS
T00925
Name
(GenBank) histone family protein DNA-binding protein
KO
K03530
DNA-binding protein HU-beta
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
rpf03032
]
Rpic12D_5039
03036 Chromosome and associated proteins [BR:
rpf03036
]
Rpic12D_5039
03400 DNA repair and recombination proteins [BR:
rpf03400
]
Rpic12D_5039
DNA replication proteins [BR:
rpf03032
]
Prokaryotic type
DNA Replication Initiation Factors
Initiation factors (bacterial)
Rpic12D_5039
Chromosome and associated proteins [BR:
rpf03036
]
Prokaryotic type
Nucleoid associated proteins
HU (heat unstable protein)
Rpic12D_5039
DNA repair and recombination proteins [BR:
rpf03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Supressor
Rpic12D_5039
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Bac_DNA_binding
HU-HIG
HU-CCDC81_euk_1
SNRNP27
Arteri_nsp7a
HTH_23
HU-DNA_bdg
HU-CCDC81_bac_2
Motif
Other DBs
NCBI-ProteinID:
ACS66273
UniProt:
C6BPZ9
LinkDB
All DBs
Position
pRp12D01:complement(321062..321346)
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AA seq
94 aa
AA seq
DB search
MNRKDLAKAIADRSNTSSAQVMRWLDAFEKVVTDAVASGDVVQIMGFGTFSTSRRRARNG
HNPGTGEEIQVPAVTTVRFSAGSRLRQAVNRERT
NT seq
285 nt
NT seq
+upstream
nt +downstream
nt
atgaacaggaaggatctggccaaggcaatcgcagaccgcagtaacacctcctcagcgcag
gtcatgcgatggttggacgcgttcgaaaaagtggtcaccgacgcggtggccagtggcgat
gtcgtacagatcatgggcttcggcacgttttctacgtctcgaaggcgcgctcggaatggc
cataatccaggcaccggagaggagatccaggttccggccgtgacaaccgttagattctcc
gccggcagccggttgaggcaggcggtgaaccgagagcggacatag
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