Ralstonia pickettii 12D: Rpic12D_5058
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Entry
Rpic12D_5058 CDS
T00925
Name
(GenBank) filamentous hemagglutinin family outer membrane protein
KO
K15125
filamentous hemagglutinin
Organism
rpf
Ralstonia pickettii 12D
Brite
KEGG Orthology (KO) [BR:
rpf00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00536 Glycosaminoglycan binding proteins [BR:
rpf00536
]
Rpic12D_5058
Glycosaminoglycan binding proteins [BR:
rpf00536
]
Heparan sulfate / Heparin
Microbial pathogens
Rpic12D_5058
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPS
Fil_haemagg
Motif
Other DBs
NCBI-ProteinID:
ACS66292
UniProt:
C6BQ18
LinkDB
All DBs
Position
pRp12D01:complement(342273..350633)
Genome browser
AA seq
2786 aa
AA seq
DB search
MRLPGQMQIAGAHASGETAAHQEQKQVNETDAHTSRHDRARHSRLIRSIAAVVALISWLG
PVQITWQAAQRSAAIFAVRTGSPFDDFGNHVASWRTTGRLLVRWGIQQAEAAPITDPTAP
IRFTPTITQTTAGVPTINVTTPNASGLSYNLLQSLTVDSGVGLVLNNSLTGGGTFLGGNV
SGNPNLAASGPASTILTQITSTTPIRINGGVEVFGAPASVIFAAPGGVYLAGAGFTNTPS
VTLVTGTPQFLNGSGSPVGFDQATAIGYTVNSGRVQIDSAAGTTNGAGIEGTVGSLNVIA
QSIGVNAALYTGQQLNLIAGNQVVTPVAAGTGRAGSDWQVSSNGPNTAANSPSAQNGLAI
DATAFGAMTSGQIKIVSTAQGLGVRAAGDMAANTSNVNIDSNGNVSVGNVYGQQNVGITS
AGSVSTTGTVKALQDVSVSANGDVNVGGAAQAGNNLSLNAGGNLTGPGNLSAAKTLTATA
GNSVNLTGDLNAANIAVTARGQDGTGDIALGGKVSSPNTIDLNAARDLALAGQVTTNGDI
QATAGRDVAISGTTQSSGATTLKAGRNIGVTNTGAVTASTTTTATAGENINVAGAIGSQG
NLQLATTNGAITTTGSLASNGAITADAGGANGDIALGGTVTTPNVLTLTAARNATVGGQL
TTGNNLQASAGLDLVVSGTTQSVGATTLSAAQDLTVAGTGSATAGTTLSATAGRNLAVSG
GTASGGDTTLNATSGTLSTSGTVLAGGNVAATGQAGTTLGGTVYATQSVTAHSGVGTTSA
TGNVIAHNGSVSLTGTNVSVSGGTQSATDTTLTATQGNATVDGQVAALGKLGVSATQDIT
GKGSTASVGDTTLAAGNNIVLTGNSQTAGNLTATATNGVSIAALPVVGGNASLSGANVSL
GSNGTTSQVNGTLTATGTQSVVTAGTIATSSANLTGGTVTNAGTVTASNALTATGTTVTN
TGTLGGATTTVHGTDVANSGLIGGQTVNVTADNSLSNQNGTLLGTQALNVTANVLTSNQN
GVMFAGSPSGSTTSGDLTATVKGGNGSFNNAGGQILAANNATLNLQNQTIDGASNLGTVN
AGNQLTYNVGAVANTGAWTLGGKSATINAANGISNTGSIQHAGDLTLSTPGAVTNSGQII
AGKNLSVSGGTVSNAAGATLHSDNDLSVSGATTNRGTVEALNDVNITGAGYDNAGALTQA
NRDVNVNVSGNVLNQAGTIGAKRDVSLTANQIINDATASTGSGTTVVTGQEVNPTYLSSV
VIGTKQVQLPIPGAGSADGGPVFGPYRFAVTIGDLKPDANGVISAYQGVETYTPANGGGP
NGNITPSLNLWHFLSPDTTSFPSADYQPAPGTPTPFITLPTVTRTETTTQDGVSGIIQAG
RNLAVTASSLSNNGGQISAANDIKMAVGTLSNGASAGSSKTITESISQGALNAFMQQLAT
QLGYNPQSGGGYPLAVLNDGCMPGECNNSGNGNGPPPGPEAPHWVWFGPSSNIGFNGNVN
IPGLAGFTATPPAPQTTVQQTAGKQGVIAAGGNIDLAQVGTLNNGGQIAAAGNITLGGSV
NNVGQLNVNRTTLPGCVGNPATCTDPGVSGGGSPYHEVIDPKQQVASIVAGGTLTANLSQ
LTNQTGTVAAAGAVQITAPTVTNTGGTIQSTTGSVTINAANGLTNQAAPTTTVYASHGSD
TSVCGKVGGTACATATQTATGDAGMILAATDLNITAGSVRNNGGAIVAGGNNTITTGSFD
NSPVFLRQYYHWSYYNQNSTASDTWGCDAAGDISGCQRVFGSNLTNGWNGTAENAPTIGQ
LNSYVSGGNLAIRSGGALINSGNIEGTAISLSGATITNGITNPSIQTPPSTSGQQVVNLG
PIGTPNAQLPATGTPDTFSGPTTVLQKGVPNPTNPGTSNGQWQFNPVVVTEQSGQTVTWH
FNAPQLGGALTSPTATGSTAQYLTSSPATAVLGGVGPATLINALPADLRPGSTPFYYDPQ
AENARLDQQALATTGRTSFVNGLTYDNQNHLTVDDQQKLILYQNAVDYAKAHNIQLGQAL
TPEQLAALDKPMLWYVSQSVPDPSCMSGACPMVTALVPQVYLPQGYSGIEPGGSIVATKS
LDLNANSPIQNTGTLGSYGTLTSNTTIVNEQRAADMTAAWQPIEDGWARVTGQQGQANSG
FVFAANAADIAGQVQNINGVLAQLNADGSMSAAESARVAQAVQAGMAAVTSTHTDTFVRA
PDVMGEIFSSVVMVAIGIMTGGAAMAAYAGVGATLTVGEMMAQAAITSMTTNAMQQASSG
MGFSFGALVKAGATSALTAGLTQGITINADGSLGMVDGLGSLPSDRSIAALSGTKVIGDG
LTQAGAATGTLGQQIAALALDATIKAGVNTGINGGSFLTNLRNSAVNDLAAVGAYSIGNL
NENGALVGPAYYAAHALLGCASSAALGTGCGGGAIGGVTSAALTPYFLDAITSNGAPLQM
DAGLQAMISTVAGLAGGGLADALGQNAQGGMAAAQNEALNNTTQHYQNVNNPLFKANVKA
LGDCVDLVSCRSNAAFLQKQMDALSDSNIAGMCGTNSACVSARQQERQLYQDAYGQAVAH
MNPDVAARDYLAAQNQAQGNRFTANDLANALQRYQSGTSDPANSADAFVTKAIVGNAALF
GAIKGITAVDSDSGGGGRLPGTAKMSLADAQAYASNRATQLQSQLPEGSQGRVTMGVGVV
QDVNGNQIVVVSTSEPRGYLRPGVTLKPGELVVPGTGHAEADIVNWASQNGYTVLTVGAG
RPICPSCAAALTGANATPATTLKLPK
NT seq
8361 nt
NT seq
+upstream
nt +downstream
nt
atgcgtctgcctggccagatgcagatcgctggcgcgcatgcgtcgggcgagactgcagca
catcaagaacaaaagcaggtcaatgagacagatgctcatacgagccgtcatgatcgcgca
cgtcattcgcggctgattcgctcaatcgcggctgtcgtcgcattgatcagctggttgggg
ccagtgcaaatcacctggcaggccgcgcaacgcagtgccgccatcttcgcggtgcgtacc
gggtctccctttgacgatttcggcaaccacgttgcatcgtggcgcacaacgggtcgcttg
ctcgtacgctggggaatacagcaggccgaagctgcgccgattaccgatcccactgcgccg
atccgcttcacgcccaccatcacgcagaccacggcgggtgtcccgacgatcaacgtgaca
actccgaatgcttcagggctttcgtacaacctgctgcagtcgctgacagtggatagcggt
gtcggtttggtgctgaacaactcgctcacgggcggcggcactttcctgggcgggaatgtt
tcgggcaatccgaacttggctgcatctgggccggcttcgaccatcctcacgcaaatcacc
agcacgacgccaatcaggataaacgggggcgttgaggtttttggggcgccggcatccgtc
atctttgccgcccccgggggcgtctacttggcgggagctggatttacgaacacgcccagc
gtcacgcttgtcaccggcacgccgcagtttctgaacggcagtggtagcccggttggcttc
gaccaagcgaccgccataggctacaccgttaacagcggccgggtccagatcgattcggca
gccggcaccaccaatggcgcgggcatcgaaggtacggttggaagcctgaacgtcatcgcg
caaagcatcggcgtcaatgctgccctctataccgggcaacaactgaacctcatcgccggt
aaccaggtggtcacgccggtggccgccggtaccggtcgcgcaggttcggattggcaggtc
agcagcaatggccccaacaccgccgccaacagcccgagcgcacagaacggcctcgctatc
gacgccaccgcgttcggtgcaatgacgagcggacagatcaaaatcgtctcgaccgcacag
ggacttggggtgcgcgccgccggcgacatggctgcgaacacgtcgaacgtgaacatcgac
agtaacggtaacgtttcggtcggcaacgtctacggccagcagaacgttggtatcacatcc
gcgggttccgtctccaccacgggtacggtcaaggcactgcaggatgtttccgtttccgca
aacggcgatgtcaacgttggtggtgccgcgcaggccggcaacaacctgagcctgaacgcc
ggcggcaatttgaccggcccaggcaatctgtctgcggccaagacgctgaccgcaaccgcc
ggcaacagcgtcaacctcacgggcgatctgaacgccgccaacattgccgtcaccgcgcgg
gggcaggatggtacgggcgatatcgccctgggcggcaaagtgtcgtcgccgaacaccatc
gacctgaatgccgcgcgagatctcgcactggcagggcaggtgaccactaacggtgacatc
caggcgacggcaggccgcgatgtggctatctccggcacgacacaaagctcaggcgccacc
acgctcaaggccggccgcaacatcggcgtgaccaataccggcgcggtgacggccagcacc
acgacgaccgccacagcaggcgagaacatcaacgtcgctggcgcgatcgggtcgcaaggc
aatctgcaattggccacgaccaatggcgccatcacgaccaccggcagtctggcgtccaac
ggagccatcaccgccgacgcgggcggtgccaacggcgatatcgccctgggcggtaccgtc
acgacgccaaacgtattgacattgacggcggcgcgcaatgcgacagtcggtggccagctc
acgacaggaaacaacctgcaggcaagtgccggtctggatctcgtcgtctctggaaccacg
cagagcgtgggggcgaccacgctcagtgcggcgcaggatctcacggttgcaggtactggc
tcagccacggctggcacaacgctgtcggccacagcaggccgtaacctcgccgtgtcgggc
ggcaccgcctccggtggcgataccaccttgaacgctaccagcggaacgctttccacctcg
ggcaccgtgctggcgggcggcaatgtcgcggccaccggccaagccggcacgacgctgggc
gggaccgtctacgcgacccagagcgtcaccgcccattctggcgtcggcaccaccagcgcg
accggcaatgtgattgcgcacaacggtagtgtctccctcacgggcaccaacgtcagtgtt
tctggcggcacgcaatcagccacggacaccaccctcactgcgacacagggcaacgccacc
gtcgacggtcaggtcgccgccctgggcaagctcggggtttccgcaacccaggacatcacc
ggcaagggaagcacagcgagcgtcggcgacaccacgctcgccgcaggcaacaacattgtg
ctaaccggcaatagccaaacggctggcaacctgaccgcgaccgcaaccaatggcgtctcc
atcgcggcactgcctgtcgtgggcggaaacgccagcctgagcggtgccaatgtgtcgttg
ggcagtaacggcacgaccagccaggtcaacggcacgctgaccgcaaccggcacgcagagc
gttgtcacggccggcaccatcgccaccagttcagccaacctgaccggcggaaccgtgacg
aatgccggcaccgtgaccgcgtccaatgcgctcacggctaccggcaccacggtcaccaat
accggcacactcggcggcgccacgacaaccgtgcacggcaccgacgtggccaactccggt
ctgatcggcggccagaccgtcaacgtgacggccgacaacagcctctcgaaccagaacggc
acgctgctgggtacgcaagcgctgaacgtcaccgccaacgtgctgacaagcaaccaaaac
ggcgtcatgtttgcgggtagcccgtcgggttcgaccaccagcggcgacttgaccgccacg
gtcaagggcggcaacggcagcttcaacaacgctggcgggcaaatccttgccgccaacaat
gccaccctgaatctgcagaaccaaactattgatggcgctagcaacctgggcacggtcaat
gcgggaaatcaactgacatacaacgtcggggccgtagccaatacgggtgcgtggacactg
ggcggcaaaagcgccacgatcaacgcggccaatggcatcagcaacacgggttcgatccag
catgcgggcgacctgacgctgtccacgccgggcgctgtaacgaacagtggccagatcatt
gcgggcaagaacctctcggtttcgggcggcacagtgagcaacgccgcgggcgccacgctg
cattcagacaacgatctgtccgtgagcggtgcgaccaccaaccgtggcacggtcgaagcg
ctcaacgatgtgaacatcactggggctggctacgacaacgcaggcgcgttgactcaggcc
aaccgcgacgtgaacgtcaacgtgtcgggcaacgtcctgaatcaagccggcacgattggc
gccaagcgcgacgtgagcctgaccgcgaatcagatcatcaacgacgcgaccgcatctacg
ggcagtggcaccaccgtcgtcaccgggcaggaggttaatcctacttatctgtcatcggtg
gtgattggcaccaaacaggttcaactgccgatccctggagccggttcggcagacggcggt
ccggtgtttggaccgtatcgcttcgccgtcacgatcggggacttgaagccggacgccaat
ggggtgatttcggcatatcagggtgtcgagacctataccccagccaatggcggcggcccc
aacggcaacatcacgccatcgctgaacctgtggcatttcctgagcccggataccaccagt
ttcccgagcgccgactatcagcctgcccctgggacgccaacgccgttcatcaccctgcct
accgtcacgcgcacagagacgacaacgcaggacggtgtcagcgggatcattcaggcgggt
cgcaatctggctgtgacagcctcgtccctgtccaataacggcggacagatcagcgcagcc
aacgacatcaagatggccgtcggtacgctctctaatggagcgtcggcgggttcctccaag
accatcactgagtccatcagccaaggcgccctcaacgccttcatgcagcaattggcgacg
cagttgggttacaacccccagtcggggggcggctatccgctcgctgtactcaacgatggc
tgcatgccgggtgagtgcaacaacagcggcaacggcaatggcccacccccagggccggaa
gcgccgcactgggtgtggttcggtccgtcttccaatattgggttcaatggcaacgtgaac
atccccggcctggccggcttcaccgccacgccgcccgccccgcaaaccacggtgcagcag
accgcaggcaagcagggcgtcattgccgctggcggaaacattgacctggcccaagtcggg
acgctgaacaatggcggccagatcgccgccgccggcaatatcacactcggcggctcggtg
aacaacgttggccaactgaacgtcaaccgcacgacgctgcccggctgcgtcggcaacccg
gcaacgtgcaccgacccaggcgtctccggtggtggcagcccgtaccacgaagtcatcgat
ccgaagcagcaggtggcgagcattgtggcaggcggcacgctcacggcgaatctgtcacag
ctaaccaaccagacggggaccgttgcagcggctggggcagtgcagattaccgcgcccacg
gtgacgaataccggtggcacgatccagtcgaccacagggtcagtgacaatcaatgccgcc
aacggtcttacgaaccaggcggcaccgaccaccacggtctacgcgagccacggctcggac
acgtcggtttgcggcaaggtcggcggtaccgcatgcgccacggccacgcagacggccacg
ggcgatgccggcatgatcctggcggccacggacctcaacatcaccgcggggtccgtgcgg
aataacggtggcgccattgtcgccggtgggaacaacacgattacgaccggcagtttcgat
aacagcccggttttcctgcggcagtattaccactggtcgtactacaaccagaactcaaca
gccagcgacacctggggctgcgatgcagcaggcgatatctccggttgccagcgggtgttc
ggcagcaacctgaccaatggctggaacggtaccgctgaaaatgccccgaccatcgggcaa
ctgaactcctatgtgagcggtggcaacctcgccatccgctcgggtggcgccctgatcaac
agcggcaacattgagggtacggcgatttcgctctcgggcgccacgatcacgaacggcatc
accaatccgtcgatccagaccccgccgtcgaccagcggccagcaagtggtgaacttgggg
ccgatcggcacgcccaatgcccagttgcccgcgacgggcacgccggacacctttagcggc
cccacaacggtgctgcagaagggcgtgccgaacccgaccaacccaggcacctcgaacggc
cagtggcagttcaaccctgtcgtggtgactgagcaaagcggtcagacggtgacgtggcac
ttcaatgcgccgcagcttggcggcgcgctgacgtcgccgacggcgacgggctcgactgcg
caatacctgaccagcagccccgcgacagcggtgttgggtggtgtgggcccggccacgctc
atcaatgcgctgccggccgacttgcgcccgggcagcacgccgttctactacgacccgcag
gcggaaaacgcgcgccttgatcagcaggccttggctacgacggggcgcaccagcttcgtc
aatggcctcacgtatgacaatcagaaccacctgacggtcgacgaccagcagaagctgatc
ctgtatcagaacgcggtcgactacgcgaaggcccacaacattcagcttggccaggcgctc
acgccggaacagcttgccgcgctggacaagccgatgctgtggtacgtaagccagtcggtg
ccggacccgagttgcatgagcggcgcgtgcccgatggtgacggcgttggtgccacaggtg
tacctgccgcagggctacagcggcattgagccgggcggctcgatcgtggcaacgaagagc
ctggacctgaacgccaacagtccaatccagaacaccggcacgctgggctcctacggcacg
ctcacgagcaacacgacgatcgtgaacgagcagcgcgcagccgatatgacggcggcgtgg
cagcccattgaggacggctgggcgcgcgtcacaggccagcaaggccaggcgaacagcggc
ttcgtgttcgcggccaacgcggcggacatcgctggccaagtgcagaacatcaacggcgtg
ctggcgcagctcaatgctgacggcagcatgagcgcagcggaatcggcgcgcgtggcgcaa
gctgtacaggctggcatggcggcagtcaccagcacgcacaccgacacgtttgtgcgtgcg
ccggacgtgatgggggaaatcttctccagcgtggtgatggtggccatcgggatcatgacc
ggtggcgcggcgatggcggcgtatgccggggtgggcgcgacgctgacggtgggcgaaatg
atggcccaggccgcgattacgtcgatgacgaccaacgccatgcagcaggccagcagcggc
atgggtttcagcttcggggcactggtcaaggcgggtgcaacttcagcgctgactgcgggg
ctaacgcaaggcatcaccatcaatgcagacggctcgcttggcatggtcgatggcctgggc
tcgctaccgtcggatcgcagcattgcggccttgtctggtacgaaggtaatcggcgacggc
ctgacacaggcgggtgccgctacggggacactcggccaacaaatcgcagcgcttgctctg
gacgccaccatcaaggcgggcgtcaacacgggtatcaacggtggcagtttcctgacgaat
ctgcggaacagcgcggtcaatgaccttgcggccgtgggtgcgtacagcatcggcaacctg
aatgagaacggcgcactagtcgggccggcgtattacgccgcgcatgctctccttggctgc
gcgagttcggctgcattgggtacaggatgcggtggtggtgcaattggaggggttaccagt
gcggcgttgacgccgtacttcttggacgcaatcacttcgaatggtgcgcctctgcagatg
gatgctggtctgcaagccatgatatcgacggttgccggcttggccggcggcgggctagcc
gacgcccttgggcagaatgctcagggtggcatggcggcagcacagaacgaggcgctcaac
aacactacgcagcactatcagaacgtcaataatccgctcttcaaggccaacgtgaaggcc
ctgggagactgtgtcgatctcgtgtcttgccgctccaacgcagctttcttgcagaagcag
atggatgcgttgagcgatagcaatatcgccgggatgtgtggaaccaactcggcttgcgtc
tccgcccgacagcaagagcgacagctgtaccaagatgcctatggccaagccgtcgcgcat
atgaatcctgatgtggctgcacgagactacctggctgcacagaatcaggcccaaggaaat
cgcttcactgccaacgatctagcaaacgcgttgcagcgctaccaatctggcactagcgat
ccagccaattctgccgacgcctttgtgaccaaggccattgtcggtaacgctgccctgttt
ggagcaatcaagggaataactgcagttgatagcgattcgggtggcggcggcaggcttcca
ggaactgcgaagatgtcccttgcagatgcacaagcctatgctagtaatcgtgcgacccag
cttcagtcgcaacttcctgaagggtcgcaaggccgagtaactatgggcgtaggtgttgta
caagatgtcaatggaaaccagatcgtcgttgtatcaaccagtgagccaagaggctacttg
cgtccaggcgtaacactgaagcccggcgagcttgtagttcccggtactggccatgctgaa
gcggatatagtcaattgggctagccagaacggctacacagtcttgaccgtcggagcggga
aggcctatttgtccttcctgtgccgctgcactgaccggtgcgaacgctactccagcaacc
accttgaagctgccgaaatga
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integrated database retrieval system
