Rickettsia prowazekii GvV257: MA5_02360
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Entry
MA5_02360 CDS
T01791
Name
(GenBank) excinuclease ABC subunit B
KO
K03702
excinuclease ABC subunit B
Organism
rpg
Rickettsia prowazekii GvV257
Pathway
rpg03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
rpg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
MA5_02360
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
rpg03400
]
MA5_02360
DNA repair and recombination proteins [BR:
rpg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
MA5_02360
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
MA5_02360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrB_inter
UvrB
Helicase_C
ResIII
UVR
DEAD
AAA_30
UB2H
Kinesin
AAA_22
Microtub_bd
DUF87
AAA_7
AAA_5
FapA
Motif
Other DBs
NCBI-ProteinID:
AFE52650
LinkDB
All DBs
Position
complement(587407..589395)
Genome browser
AA seq
662 aa
AA seq
DB search
MNNFSIISGYKPAGDQPKAIDEIITGLNSKKRSQMLLGITGSGKTFTMANIIERTNRPTL
IMAHNKTLAAQIYLEMKSIFPKNAVEYFVSYYDYYQPESYIVRTDTFIEKDSSINEQIDL
MRHSATRSLLERRDVIVISSVSCIYGLGAPDLYYQMTVHLEPGQNYPRDKLLNDLINLQY
KRNDIGFERGCFRVKGDNMDIFPSHYSDKAWRLSFFGDELEYIHEFDPLTGEKLTQLDKA
MIFGNSHFVMPRERINHAISSIEVELQKRLEFLKSQDKLIEAKRLNQRTLYDLEMLTETG
SCKGIENYSRFFTGRNAGQPPPTLFEYLPEDALLFIDESHVSVPQIRAMYNSDRARKEVL
VEHGFRLPSALDNRPLKFEEWEKFRPQTVFVSATPGQFELEETGGTVVELIIRPTGLLDP
ECIIKPATNQVEDLISEIQTTINTGLRILVTTLTKKMAEDLTSYLQDLQYKTYYLHSNIH
TLERIEILRNLRQGTIDILVGINLLREGIDIPECGLVAILDADKEGFLRSETSLIQTIGR
AARNSRGKVILYADKMTKSIDKAVSETLRRRQIQQEYNKKHGIIPKTINRAIHALESLEE
IHDNKLDKKQANALLNNPAKLKDHMDKLKKEMFKAASNLEFEQAAKLRNQLKALEEAALK
LS
NT seq
1989 nt
NT seq
+upstream
nt +downstream
nt
atgaataatttttctattatctcaggatataaacccgcaggcgatcaaccaaaagcaata
gatgaaattataacagggttaaatagtaaaaaacgctcacaaatgttgcttggtattact
ggatcaggcaaaacttttactatggcaaatattatagaaagaactaatagacctactctt
attatggctcataataaaactttagctgcacaaatctatttagaaatgaaatcaattttt
ccaaagaatgcagttgaatattttgtctcatattatgattattatcagccagaatcttat
atagtacgcactgatactttcatcgaaaaagattcatcaattaacgaacagattgattta
atgcgtcattctgctacaagatcattattagagcgtcgtgatgtaatagtaatttcgtct
gtttcgtgtatttatggacttggcgcccctgatttatattatcagatgactgtgcattta
gaacctggtcaaaactatcctcgtgataagttactaaatgatttgataaatctacaatat
aagcgtaatgatatcggatttgagcgtggctgttttagggttaaaggtgacaacatggat
atttttccctcacattatagcgataaagcttggcgtttatcatttttcggtgatgaactc
gaatatattcatgaatttgacccattaacaggtgagaaacttactcagcttgataaagct
atgatttttggtaattcacactttgttatgccacgagaaaggataaatcatgcgatatca
agcattgaggtggagttgcaaaaacgcttagagttcttaaagtcacaagataaactaatt
gaagcaaaaagattaaaccaacgtactctatatgatcttgaaatgttaacagaaacaggc
agctgtaaaggcattgaaaattactctcgctttttcacagggcgtaatgctggtcagcct
cctcctacattattcgagtatttacctgaagatgctttattgtttattgatgaaagccat
gtatcagtaccacaaattagagcgatgtataacagtgatcgagcacgaaaagaagtatta
gtagagcatggatttcgtttaccttctgctcttgataatagacctttaaaatttgaagaa
tgggaaaaatttaggccacaaactgtgtttgtatctgcaactccaggacaattcgagtta
gaagaaacaggtggcactgtagtagagctgattatcagacctacaggacttctagatcct
gaatgtattattaaacctgctactaaccaagtcgaggatttaattagtgaaattcaaaca
actatcaatacaggtttgcgtatcttagtcactacattaacaaaaaaaatggctgaagat
ttaacatcttatttgcaggatctgcaatataaaacatattatttgcattccaatatacat
actctagaacgtattgaaatattaagaaatttaagacaaggtactatcgatattttagtc
ggtattaatctattaagagaggggattgatatacctgaatgcggtttagttgctatactt
gatgcagacaaagagggatttttacgatctgaaacatcactaatacaaacaataggaaga
gctgcaagaaatagtagaggcaaagttatactgtatgccgataaaatgactaaatctatc
gataaagctgttagtgaaacattacgtaggaggcaaattcaacaagaatataataaaaaa
catggtataattccaaaaactataaatcgtgctattcatgctttagaatcactcgaagaa
atccatgataataagctcgataaaaaacaagctaatgctttattgaataatcctgctaag
ctaaaagatcatatggataaattaaaaaaagaaatgtttaaagctgcaagtaatcttgaa
tttgaacaagctgcaaaactccgtaaccaacttaaagctctagaagaggcagcactgaag
ttaagctaa
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